Processing math: 100%
Research article Topical Sections

The effects of arbuscular mycorrhizal fungi and essential oil on soil microbial community and N-related enzymes during the fungal early colonization phase

  • The arbuscular mycorrhizal fungi (AMF) and the essential oils are both agents of sustainable agriculture, and their independent effects on the community of free-living soil microbes have been explored. In a tomato pot experiment, conducted in a sandy loam mixture, we examined the independent and joint effects of inoculation with the fungus Rhizophagous irregularis and the addition of Mentha spicata essential oil on the structure of the soil microbial community and the activity of soil enzymes involved in the N-cycle, during the pre-symbiosis phase. Plants were grown for 60 days and were inoculated with R. irregularis. Then pots were treated with essential oil (OIL) weekly for a period of a month. Two experimental series were run. The first targeted to examine the effect of inoculation on the microbial community structure by the phospholipid fatty acids analysis (PLFAs), and enzyme activity, and the second to examine the effects of inoculation and essential oil addition on the same variables, under the hypothesis that the joint effect of the two agents would be synergistic, resulting in higher microbial biomass compared to values recorded in singly treated pots. In the AMF pots, N-degrading enzyme activity was dominated by the activity of urease while in the non-inoculated ones by the activities of arylamidase and glutaminase. Higher microbial biomass was found in singly-treated pots (137 and 174% higher in AMF and OIL pots, respectively) compared with pots subjected to both treatments. In these latter pots, higher activity of asparaginase (202 and 162% higher compared to AMF and OIL pots, respectively) and glutaminase (288 and 233% higher compared to AMF and OIL pots, respectively) was found compared to singly-treated ones. Soil microbial biomasses and enzyme activity were negatively associated across all treatments. Moreover, different community composition was detected in pots only inoculated and pots treated only with oil. We concluded that the two treatments produced diverging than synergistic effects on the microbial community composition whereas their joint effect on the activity of asparaginase and glutaminase were synergistic.

    Citation: George P. Stamou, Sotiris Konstadinou, Nikolaos Monokrousos, Anna Mastrogianni, Michalis Orfanoudakis, Christos Hassiotis, Urania Menkissoglu-Spiroudi, Despoina Vokou, Efimia M. Papatheodorou. The effects of arbuscular mycorrhizal fungi and essential oil on soil microbial community and N-related enzymes during the fungal early colonization phase[J]. AIMS Microbiology, 2017, 3(4): 938-959. doi: 10.3934/microbiol.2017.4.938

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  • The arbuscular mycorrhizal fungi (AMF) and the essential oils are both agents of sustainable agriculture, and their independent effects on the community of free-living soil microbes have been explored. In a tomato pot experiment, conducted in a sandy loam mixture, we examined the independent and joint effects of inoculation with the fungus Rhizophagous irregularis and the addition of Mentha spicata essential oil on the structure of the soil microbial community and the activity of soil enzymes involved in the N-cycle, during the pre-symbiosis phase. Plants were grown for 60 days and were inoculated with R. irregularis. Then pots were treated with essential oil (OIL) weekly for a period of a month. Two experimental series were run. The first targeted to examine the effect of inoculation on the microbial community structure by the phospholipid fatty acids analysis (PLFAs), and enzyme activity, and the second to examine the effects of inoculation and essential oil addition on the same variables, under the hypothesis that the joint effect of the two agents would be synergistic, resulting in higher microbial biomass compared to values recorded in singly treated pots. In the AMF pots, N-degrading enzyme activity was dominated by the activity of urease while in the non-inoculated ones by the activities of arylamidase and glutaminase. Higher microbial biomass was found in singly-treated pots (137 and 174% higher in AMF and OIL pots, respectively) compared with pots subjected to both treatments. In these latter pots, higher activity of asparaginase (202 and 162% higher compared to AMF and OIL pots, respectively) and glutaminase (288 and 233% higher compared to AMF and OIL pots, respectively) was found compared to singly-treated ones. Soil microbial biomasses and enzyme activity were negatively associated across all treatments. Moreover, different community composition was detected in pots only inoculated and pots treated only with oil. We concluded that the two treatments produced diverging than synergistic effects on the microbial community composition whereas their joint effect on the activity of asparaginase and glutaminase were synergistic.


    Abbreviations: FBG: Fluidized bed granulation; QbD: Quality by Design; TCM: Traditional Chinese medicine; RF: Random forest; Tg: Transition temperature; DST: Dynamic surface tension; Work: Work of adhesion; FGSM: The sum of low molecular weight saccharides; DOE: Design of experiment; CFD: Computational Fluid Dynamics; DEM: Discrete element method; PBM: Population balance model; NIR: Near-infrared reflectance; MD: Maltodextrin; EST: Equilibrium surface tension; ZS: The sum content of malic acid and citric acid; ECR: The aqueous extract of Codonopsis radix; ECH: The aqueous extract of Cistanches Herba; HPMC: Hydroxypropyl methyl cellulose; HPLC-ELSD: High-performance liquid chromatography with evaporative light scattering detection

    FBG is a size enlargement process integrating mixing, wetting, granulating and drying in a single piece of equipment. The formation process proceeds as follows. Atomized feed solutions are sprayed onto a fluidization solid particle bed, causing the particles to become wetter and stickier, facilitating mutual particle bonding and the creation of a liquid bridge through a combination of capillary and viscous forces. Subsequently, solid bridges are formed through either a drying or sintering processes, resulting in particle enlargement [1]. Due to its advantages, such as high production efficiency, uniform temperature distribution, large solid-gas contact area, high heat transfer rate with low material loss during transfer and uniform mixing of the product, among others, FBG has been widely used as a granule fabrication technology in the pharmaceutical industry [2].

    Defluidization, resulting from the formation of significant agglomerates, represents an adverse occurrence in the FBG granulation process, potentially precipitating process halts, heightened loss rates and the rejection of complete batches, among other complications. It is a phenomenon shaped by a myriad of factors ranging from formulation architecture and the physical-chemical attributes of feed solutions to the primal particle dimensions, operational stipulations, droplet dimensions and the machinery's geometric design [3,4,5]. Given the intrinsic complexity of the FBG procedure, improper formation parameters can catalyze undesirable granulation dynamics, escalating to the point of defluidization. Consequently, fostering a nuanced understanding of the interrelations among the critical material attributes, critical process parameters and critical quality attributes becomes indispensable. Establishing this understanding within a quality by design (QbD) framework for manufacturing processes assumes paramount importance in safeguarding the quality and efficacy of the production cycle [6,7].

    Numerous studies have substantiated that procedural parameters critically influence agglomeration kinetics, thereby facilitating a macro-control strategy for FBG grounded in macro-scale perspectives. Ming et al. [8] underscored the pronounced impact of inlet air temperature, binder solution rate and binder-to-powder ratio on pivotal quality attributes including flowability, temperature regulation, moisture content, aggregation indices and compactability. Additionally, Krzywanski et al. [9] leveraged a fuzzy logic methodology to optimize fluidized bed jet milling processes, demonstrating that augmenting working air pressure and test duration while reducing rotational speed amplifies process effectiveness, yielding optimal predictive performance. In parallel, the advent of computer simulations and large-scale parallelization techniques have catalyzed an enriched understanding of the FBG process through mechanism models [10] and in-line process analytical technology [11]. These advancements permit the high-definition visualization of simulation outcomes based on various mechanistic models, illuminating the effects of equipment geometry and process parameters on elements such as pressure drop, velocity fluctuations, temperature variations and alterations in solid volume fractions across different fluid flow domains [12]. This analytical paradigm extends to detail the dispersion of the solid phase and delineates collision energy and frequency, alongside contact force dynamics [13]. Furthermore, mechanistic rate expressions forge connections between particle growth phases and the aforementioned determinants [14], facilitating in-line techniques to monitor transformations in transport velocity [15], moisture retention [16] and granule surface compositions [17], thus enhancing the depth of understanding in FBG processes. A growing body of evidence, supported by emerging technologies, corroborates the substantial role of process factors in dictating agglomeration kinetics [18,19].

    In the context of feed solutions, a considerable number of researchers have honed in on analyzing the ramifications of nozzle configuration and varied process parameters on the spraying procedure. The collective findings highlight those factors such as spray air pressure [20,21], and the differences in velocity between liquid and gas phases or liquid volume flow rates [22,23] exert the most substantial influence on droplet dimensions. The drying trajectory of these droplets is principally dictated by gas parameters including velocity, viscosity and density, alongside binder attributes and ambient temperature. It is observed that smaller droplets undergo rapid desiccation before interacting with primary particles, thereby yielding a proliferation of diminutive particles constituted of purely dried feed solution. This stands in contrast to larger droplets, which demonstrate a protracted drying cycle. Instances where droplets are excessively large and sprayed at high velocities may provoke a collapse [24]. Under conditions of reduced atomization pressures and elevated temperatures paired with high spray speeds and large droplets, there is a tendency to foster increased surface ruggedness, whereas the reverse conditions facilitate the formation of smooth and densely structured granules [25]. Concurrent research dictates that particle characteristics are fundamentally shaped by process parameters and the inherent properties of the feed solution [26]. In a pertinent study, Düsenberg et al. [27] posited that it is the agglomerate morphology and stability predominantly driven by material properties that hold a higher sway over the outcome, compared to spray parameters. In scenarios with unsuitable parameters, the risk of collapse increases [24]. However, in terms of material properties, the influence remains somewhat limited to a handful of aspects such as viscosity, surface tension or contact angle impacting the particle aggregation mechanics, a topic explored in further depth in subsequent studies [28,29,30,31].

    However, the FBG process, when applied to TCM utilizing aqueous extracts from Chinese medicinal herbs as feed solutions, faces substantial challenges. Desired agglomeration often occurs alongside unfavorable outcomes such as the formation of large agglomerates and pronounced sticking, outcomes spurred by excessive wetting and nucleation, culminating in defluidization. Simple adjustments to the previously mentioned physical and chemical parameters, or alternations in equipment and process parameters, fall short in fully mitigating the defluidization issue. While the incorporation of excipients serves to somewhat alleviate this concern, the fundamental underlying mechanism remains elusive. Consequently, predicting defluidization persists as a daunting challenge, and a concrete delineation of the pivotal feed solution physical parameters that dictate process viability remains undefined.

    This study endeavors to enhance the comprehension of the influence exerted by the physicochemical parameters of the feed solution on the granulation procedure. It involved an extensive assessment of the feed solutions extracted from 50 varieties of Chinese medicinal materials, wherein 11 physical attributes and 10 chemical components were meticulously identified. Moreover, the granulation loss rate was instituted as a benchmark for evaluating granulation feasibility. Subsequently, essential indicators influencing granulation feasibility were discerned from the pool of potential physicochemical parameters under consideration. This was followed by an exploration of the association rules between these critical parameters and loss rates. Lastly, evaluation criteria for defluidization were established based on the association rules. These criteria aid in achieving a deeper understanding of the process and elucidate the factors influencing FBG.

    50 herbs were purchased from Beijing Qiancao Medicinal Materials Electuary Co. Ltd. (Beijing, China). The herbs were extracted by reflux extraction. In brief, an appropriate amount of the herbs was placed into a round-bottom flask, and eight times the volume of deionized water (w/v) was added. The reflux extraction method was used for extraction with 1.5 hours per cycle, and the process was repeated once following the procedure mentioned above. Subsequently, the aqueous extract was concentrated to a density of 1.15 g/cm3 (50℃) to obtain the traditional Chinese medicine decoctions.

    The feed solution contains a large number of small molecules of sugars, polysaccharides and proteins, which are in an amorphous state, and has a glass transition phenomenon. In order to maintain the feed solution properties [32], a freeze-drying technique was used to dry 50 types of Chinese medical aqueous decoction into solid powder, and Tg was measured for each sample to reflect the thermodynamic properties of the material in the drying or granulation. The thermograms of the samples were determined by DSC-Q2000 (TA Instruments, USA), equipped with a double scanning procedure to improve the measurement accuracy. The scanning procedures were based on Shi's report [33]. About 5 mg of samples were used, and the endpoint temperature in the heating procedure was 200℃ for each program. The midpoint temperature was considered to be Tg [34].

    Wettability, an essential variable during the nucleation stage in FBG, was evaluated via contact angle measurements. To minimize measurement error, maltodextrin (MD) powders, with a fixed weight of 300 mg, were compacted using an infrared tablet pressing mechanism (Tianjin Botianshengda Technology Development Ltd. Co., China) with 13 mm diameter punching and die sets. The load was maintained at 1MT, and the load was held for 1 minute during pressing.

    The contact angles between the MD tablet and feed solution were measured by the DSA100 contact angle tester (Krüss Ltd. Co., Hamburg, Germany). The sessile drop method was used with a dripping velocity of 2 μl/s, and droplet volume of 2 μl. All analyses were carried out in quintuplicate.

    The EST values of feed solutions were measured with a K100 surface tension meter (Krüss Ltd. Co., Hamburg, Germany). The EST calibration value was 72.00 ± 0.50 mN/m with approximately 36 ml distilled water at 25℃. Subsequently, the sample EST was recorded over time using the ADVANCE software. The result was presented as an average of five readings for each sample.

    The DST values over 10~1000 ms of samples were conducted using a BP100 bubble pressure tension meter (KRÜSS Ltd. Co. Hamburg, Germany). The experimental conditions were detailed in the report of Cheng et al. [35]. Diagrams illustrating the DST over 10 ~ 1000 ms were recorded.

    The rheological properties were determined using a rotational rheometer (MCR2, Anton Paar, Austria) equipped with a CC-27 rotor system (Coaxial cylinder type). Before measurement, samples were submerged in a water bath (EYELA, Japan) heated up to 50℃. The measurements included plotting viscosity vs. time curves at a shear rate 50 s-1 at 50℃, recording 50 data points every 300 s. The result was presented as an average of five values for each sample.

    The thixotropy was measured using a rotational rheometer, with the thixotropic ring area representing the energy required to disrupt the internal structure of the aqueous extracts. The three-stage measurement procedure is as follows. In the first step, a shear rate range of 0.01 ~ 1000 s-1 was used, and 30 data points were recorded throughout the 300 s. In the second step, a shear rate of 1000 s-1 was maintained for 5 s, and 5 data points were recorded. In the third step, the shear rate ranged from 1000 to 0.01 s-1, and 30 data points were recorded over a period of 300 s. In the rheological curve diagram, an upper and lower rheological curve formed a closed "shuttle-type" thixotropic loop representing its thixotropy.

    PH value was measured using an S20 PH meter (SevenEasy. Mettler-Toledo), and conductivity was determined using an FE38-Standard conductivity meter (Mettler-Toledo) at 25℃.

    The droplet size was measured using a laser particle size analyzer (winner 319, Winner Particle Jinan, China). Data was obtained by measuring the intensity of light scattered as a laser beam passes through a spray. The process conditions included atomization pressure set at 1.5 kg/cm2, spray rate at 10 rad/min, a measured distance of 100 mm from the nozzle tip and a nozzle with a 0.8 mm diameter. The nozzle was secured using a method similar to that in Zeng's report [36].

    The contents of fructose, glucose, sucrose and maltose in feed solutions were determined using a high-performance liquid chromatography with evaporative light scattering detection (HPLC-ELSD) method. The analysis was performed on a Waters XBridge® amide column (250 mm × 4.6 mm, 5 μm) with isocratic elution of 80 : 20 acetonitrile/water containing 0.2% triethylamine(v/v). The drift tube temperature was set at 95℃ and the flow rate was maintained at 2.6 L/min.

    A modified method, as described by Liu [37], was utilized to evaluate malic acid and citric acid. In brief, the method was as follows: column-a Waters XSelect® HSS T3 column (250 mm × 4.6 mm, 5 μm); mobile phases-5:95 acetonitrile/water with 0.5% ammonium dihydrogen phosphate (PH set to 2.35 with 1mol/L Phosphoric Acid solution); flow rate-0.5 mL/min; column temperature-25℃; detection wavelength-214 nm.

    Polysaccharide contents were determined using the phenol-sulfuric acid method [38]. According to the 2020 edition of the Chinese Pharmacopoeia, polyphenols and tannins were determined following the requirements of protocol 2202, while proteins were assessed using protocol 0731.

    Before granulation, the 50 types of aqueous extract from Chinese medicine as feed solutions were heated and preserved at 50℃ throughout the entire process. A total of 150 g of MD, sieved through a 180 µm sieve, was introduced as the initial particles in the bed chamber. The batch size was maintained at a fixed value of 300 g.

    A lab-scale batch fluidized bed granulator (WBF-2G, Chongqing Enger Granulating & Coating Technology Co., Ltd., China) was used in the granulation process. Prior to the experiment, MD was preheated in the reactor under dry fluidization conditions at a constant inlet air temperature of 80℃ and a flow rate of 60 m3/h for 10 minutes, reaching a preheat temperature of approximately 40℃. The feed solution injection began once thermal equilibrium was reached. The process parameters were as follows: inlet air temperature, 75℃; flow rate, 60−80 m3/h; atomizing pressure, 1.5 kg/cm2; ambient humidity, 20−35%; peristaltic pump speed, 10 rad/min (equivalent to 10 ml/min). Similarly, the following parameters were used during the drying process: drying time, 5 min; inlet fluidizing velocity, 80−50 m3/h based on visually acceptable fluidization. Samples were collected after completion of the process and dried in a drier until residual moisture content dropped below 3%. These process parameters ensured consistent levels of fluidization state and particle trajectory, as observed in previous studies.

    The defluidization phenomena were observed in the FBG. The loss rate was calculated as the ratio of the reduction in the dried mass of solids collected to the sum of MD and the mass in the feed solution.

    Data mining is utilized to uncover patterns and rules within intricate datasets. Considering the complexity of the data, a random forest algorithm was used to screen the vital characteristic variables affecting the particle loss rate. Then, an association algorithm was used to quantitatively examine the association rules between different physicochemical parameters and the loss rates using Python (version 3.9).

    The RF algorithm has gained popularity in various scientific fields as a machine learning technique. It is employed not only for constructing prediction models through classification or regression, but also for permutating the importance of variables in both high-dimensional data and computational models. It is appropriate for analyzing continuous variables, discrete variables or missing data. In this study, the RF classification algorithm was used to uncover nonlinear and complex relationships between physicochemical parameters and loss rates, as well as identify fundamental properties that contribute to defluidization effects and influence granulation feasibility [39].

    RF is an integrated learning method that consists of multiple decision trees. The corresponding steps were summarized as follows: The original dataset was assumed to be composed of input variables with n-dimensional vectors and an output variable. First, training data was generated from the original dataset to establish the RF model. Second, for each tree in the forest, an in-bag dataset was randomly selected from the upper dataset. This process was repeated until n-trees were grown using the CART algorithm, which employs binary recursive partitioning. Lastly, Gini importance, permutation importance or conditional permutation importance were used to permutate variable importance measures. Accuracy, precision, recall and F1-score were performance metrics to evaluate classification models [40].

    Association rule analysis was utilized to reflect the dependence and correlation between two variables, enabling the prediction of event Y based on event X when a specific correlation exists between events XY. The Apriori algorithm is a well-known method that utilizes an item-based, discovery-oriented approach to uncover association rules. Its core is an iterative method of hierarchical search to find frequent itemsets and reveal all relationships among items. To boost computational efficiency and filter out invalid candidate itemsets and generated association rules, an optimized Apriori algorithm [41] was applied to reveal multidimensional association rules with the combination of multiple factors. In this approach, the front and rear items of the dataset were first fixed according to physicochemical parameters and granular properties. Subsequently, all the front and rear items were stored separately. In this study, the itemsets with physicochemical parameters were brought into the front itemset, while those relating to granular properties were brought into the rear itemset. Through data scanning, the candidate items were calculated and filtered according to the predefined support, confidence and lift threshold. Support indicates the probability of simultaneously containing both X and Y within the entire database. Confidence represents the probability of Y occurring given that X has occurred. Lift represents the ratio of the probability of simultaneous occurrence of both X and Y to the probability of Y occurring alone. The lift value greater than 1 suggests a strong relationship between the two items. The corresponding equations for support, confidence and lift threshold were given below.

    Support(XY)=P(X,Y)P(I) (1)
    Confidence(XY)=P(X,Y)P(X) (2)
    Lift(XY)=P(X,Y)P(X)P(Y) (3)

    where P(X) is the probability of X occurring alone; P(Y) is the probability of Y occurring alone; P(X, Y) is the probability of both X and Y co-occurring. X represents specific-range physicochemical parameters, and Y represents specific-range loss rate. Finally, I refers to the entire database.

    The strong association rules meeting the criteria were ultimately obtained, ensuring each rule is presented in the anticipated format for research purposes. Therefore, the optimized Apriori algorithm was utilized to mine relationships between physical parameters, chemical properties and loss rate of granulation from a dataset of 50 samples. Moreover, it was aimed to discover the fundamental properties that affect the feasibility of granulation by the analysis of these association rules.

    The physical properties and the content of the chemical components of 50 herbal solutions were determined. Figure 1 illustrated the wide distribution of physicochemical properties across all samples without extreme outliers. It indicated that the selected samples and the subsequent analysis results were reasonably representative.

    Figure 1.  Heat map analysis of physical and chemical properties of 50 herbal solutions.

    The RF method was employed to analyze the importance of the 21 variables affecting the granulation loss rate across about 50 types of herbs. A random grid search method with 10-fold cross-validation was used to avoid overfitting to determine the optimal hyperparameter values before constructing the model. Figure 2(a) depicted the importance of independent variables, while Figure 2(b) presented performance metrics such as accuracy, precision, recall and F1-score used to confirm the optimal number of variables. The variables ranked in descending order of importance are: Tg, DST100ms, Fructose, DST1000ms, DST10ms, Glucose, Protein, Conductivity. Figure 2(b) illustrated performance metrics that demonstrated the RF model's accurate classification of loss rates, achieving an accuracy of 0.86, a precision of 0.85, a recall of 0.79 and an F1-score of 0.81 in the best model utilizing the top 8 variables. Selecting these top 8 variables only in the model development process ensured its robustness. Among these variables are factors related to physical properties like Tg, DST100ms, DST1000ms, DST10ms and Conductivity. Factors related to chemical properties like Fructose, Glucose and Protein. These factors were listed among the top 8 most important variables related to particle loss rate.

    Figure 2.  The results of variable determination based on RF. (a) Importance of different variables; (b) Model performance evaluation.

    Normalizing and discretizing the data is necessary to adhere to the Apriori algorithm, Figure 3 illustrated the results of discretization, where each impact factor was divided into six categories based on different ranges, and loss rate was separated into three categories.

    Figure 3.  Discretization results of impact factors. (a) Tg; (b) DST100ms; (c) DST1000ms; (d) DST10ms; (e) Conductivity; (f) Fructose; (g) Glucose; (h) Protein; (i) Loss rate.

    The loss rates in the granulation process were divided into three grades. When the defluidization phenomenon occurred by the formation of large agglomerates, the loss rate was classified as level 3 (50,100). When larger aggregates adhere to the wall but do not lead to a collapse, the loss rate was classified as level 2 (15, 50). When abrasion, fragmentation, slight wall adhesion, spray drying or normal fluildization result in the desired granulation, the loss rate was classified as level 1 (0, 15). It is generally accepted as a satisfactory production result in the FBG process. Next, the items with physicochemical parameters were brought into the front itemset, and the loss rate was brought into the rear itemset. Finally, strong association rules meeting the requirements were obtained. Figure 4 depicted the association rules of the top 8 impact factors to the loss rate satisfying the pre-defined metrics. These top 8 impact factors provide essential insights into the relationship between physicochemical parameters and loss rate.

    Figure 4.  Association rules satisfying the evaluation indicators. (The number of 1–6 corresponds to different levels of each factor, respectively).

    The Tg was brought into the front itemset, and the loss rate was brought into the rear itemset. The association rules that met the requirement were as follows. T1→L3 > T2→L2 > T6→L1 > T5→L1 > T3→L1 > T4→L1 (Table 1). The results indicated a decrease in loss rates with an increase in Tg (Figure 5(a)). A confidence level of 1 was observed for Tg (11.42, 29.04) → loss (50,100), suggesting a 100% probability of defluidization occurring when Tg was below 29.04 ℃. Similarly, a confidence level of 1 was found for Tg (29.04, 53.80) → loss (15, 50), indicating a complete occurrence of larger aggregates or sticking to the wall but not bed collapses when Tg fell within the range of (29.04, 53.80). Furthermore, a confidence level of 0.82 was obtained for Tg (53.80,123.10) → loss (0, 15), implying an 82% probability of normal granulation when Tg exceeded 53.80℃. In conclusion, Tg at 29.04℃ might be a transitional point influencing defluidization during FBG under material temperatures around 40 ± 2℃ in the granulation process. Considering these findings, Tg at approximately 53.80℃ might be another transitional point affecting granulation feasibility.

    Table 1.  Association rules between Tg and loss rate.
    Factor code Front itemset Rear itemset Support Confidence Lift
    T1→L3 Tg = (11.42, 29.04) Loss = (50.0,100.0) 0.18 1.00 5.67
    T2→L2 Tg = (29.04, 53.80) Loss = (15.0, 50.0) 0.16 1.00 3.64
    T3→L1 Tg = (53.80, 88.39) Loss = (0.0, 15.0) 0.14 0.78 1.42
    T4→L1 Tg = (88.39, 94.46) Loss = (0.0, 15.0) 0.12 0.75 1.37
    T5→L1 Tg = (94.46, 99.06) Loss = (0.0, 15.0) 0.14 0.88 1.59
    T6→L1 Tg = (99.06,123.10) Loss = (0.0, 15.0) 0.16 0.89 1.62

     | Show Table
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    Figure 5.  Relationship of Tg and loss rate. (a) Association rules based on Apriori algorithm; (b) Tg of ECR with different contents of MD. (Notably, the confidence in the figure refers to the total confidence when there is a loss rate of over 15% due to undesired granulation processes).

    Different concentrations of MD were added to the aqueous extract of Codonopsis radix (ECR). The Tg values of ECR over the concentrations of the MD were shown in Figure 6. The Tg value of ECR alone was 13.46℃, which was significantly lower compared to the Tg values observed for ECR + 5%MD, ECR + 10%MD, and ECR + 15%MD, where Tg increased significantly to 23.10℃, 47.92℃ and 57.06℃, respectively. The corresponding loss rate decreased, ranging from 100% to 29.47%, then 13.67% (Figure 5(b)). Furthermore, this transition shifted the granulation state from a collapsed bed to a larger wet mass toward achieving a normal fluidization state. Consequently, materials with high Tg exhibited reduced wall adhesion or defluidization during FBG processing, underscoring the critical role of Tg in determining FBG feasibility.

    Figure 6.  Tg of ECR with different additives. (a) ECR; (b) ECR + 5%MD; (c) ECR + 10%MD; (d) ECR + 15%MD.

    During the granulation process, the solutions were dispersed into droplets through the atomizer within a few seconds, and the surface tension was always in an unbalanced state. Studying DST is of great significance. The DST was brought into the front itemset, and the loss rate was in the rear itemset. Table 2 and Figure 7 showed association rules meeting the requirement. The impact factors from strong to weak were in the following order. DST100ms > DST1000ms > DST10ms. As for DST100ms, the rules from strong to weak were as follows. D21→L1 > D26→L3 > D22→L1 > D23→L1 > D25→L2 > D24→L2. Confidence was 1 for D21→L1 (DST100 ms (44.46, 53.16) → loss (0, 15), indicating that if the DST100ms ranged from 44.46 to 53.16, the probability of the granulation within the normal loss rate equals 100%. It can be summarized by analyzing Figure 7(a). As the DST100ms of the feed solutions increases, the loss rate also increases, which is not conducive to the granulation process. This trend was consistent for DST10ms and DST1000ms, as shown in Figures 7(b), (c). It means that as the DST increases, the chances of defluidization also increase.

    Table 2.  Association rules between DST and loss rate.
    Factors Factor code Front itemset Rear itemset Support Confidence Lift
    DST100ms D21→L1 DST100ms = (44.46, 53.16) Loss = (0.0, 15.0) 0.18 1.00 1.82
    D22→L1 DST100ms = (53.16, 54.90) Loss = (0.0, 15.0) 0.14 0.88 1.59
    D23→L1 DST100ms = (54.90, 59.27) Loss = (0.0, 15.0) 0.14 0.78 1.42
    D24→L2 DST100ms = (59.27, 62.95) Loss = (15.0, 50.0) 0.10 0.63 2.28
    D25→L2 DST100ms = (62.95, 66.66) Loss = (15.0, 50.0) 0.12 0.75 2.73
    D26→L3 DST100ms = (66.66, 70.16) Loss = (50.0,100.0) 0.16 0.89 5.04
    DST1000ms D31→L1 DST1000ms = (42.83, 49.51) Loss = (0.0, 15.0) 0.16 0.89 1.62
    D32→L1 DST1000ms = (49.51, 52.48) Loss = (0.0, 15.0) 0.16 1.00 1.82
    D33→L1 DST1000ms = (52.48, 54.57) Loss = (0.0, 15.0) 0.16 0.89 1.62
    D34→L2 DST1000ms = (54.57, 59.47) Loss = (15.0, 50.0) 0.10 0.63 2.28
    D35→L2 DST1000ms = (59.47, 61.58) Loss = (15.0, 50.0) 0.10 0.63 2.28
    D36→L3 DST1000ms = (61.58, 69.25) Loss = (50.0,100.0) 0.12 0.67 3.78
    DST10ms D11→L1 DST10ms = (46.48, 56.06) Loss = (0.0, 15.0) 0.18 1.00 1.82
    D12→L1 DST10ms = (56.06, 60.04) Loss = (0.0, 15.0) 0.14 0.88 1.59
    D13→L1 DST10ms = (60.04, 63.57) Loss = (0.0, 15.0) 0.14 0.78 1.42
    D14→L2 DST10ms = (63.57, 67.17) Loss = (15.0, 50.0) 0.10 0.63 2.28
    D15→L2 DST10ms = (67.17, 70.4) Loss = (15.0, 50.0) 0.12 0.75 2.73
    D16→L3 DST10ms = (70.4, 72.71) Loss = (50.0,100.0) 0.14 0.78 4.41

     | Show Table
    DownLoad: CSV
    Figure 7.  Association rules of DST, Conductivity and loss rate. (a) DST10ms; (b) DST100ms; (c) DST1000ms; (d) Conductivity; (e) DST of ECH with different contents of HPMC. (Notably, the confidence in the figure refers to the total confidence when there is a loss rate of over 15% due to undesired granulation processes).

    Different concentrations of HPMC were added to the aqueous extract of Cistanches Herba (ECH). The DST values of ECH alone ranged from 71 ± 0.5 to 64.5 ± 0.5 mN/m over 2000 ms. However, the DST values of ECH containing 5~13% HPMC significantly decreased, and the loss rates were significantly reduced by adding HPMC (Figure 7(e)). Therefore, low surface activity was conducive to effective FBG, which was consistent with the results in Wang's report [42].

    The conductivity was brought into the front itemset, and the loss rate was brought into the rear itemset. Table 3 depicted the association rules meeting the requirement. The rules from strong to weak were as follows. C6→L1 > C5→L1 > C2→L2 > C4→L1 > C1→L3 > C3→L1. Figure 7(d) showed that the loss rate increased with the decrease in conductivity.

    Table 3.  Association rules between conductivity and loss rate.
    Factor code Front itemset Rear itemset Support Confidence Lift
    C1→L3 Conductivity = (2.5, 6.21) Loss = (50.0,100.0) 0.10 0.56 3.15
    C2→L2 Conductivity = (6.21, 8.36) Loss = (15.0, 50.0) 0.10 0.63 2.28
    C3→L1 Conductivity = (8.36, 10.55) Loss = (0.0, 15.0) 0.10 0.56 1.01
    C4→L1 Conductivity = (10.55, 13.32) Loss = (0.0, 15.0) 0.10 0.63 1.14
    C5→L1 Conductivity = (13.32, 20.92) Loss = (0.0, 15.0) 0.12 0.75 1.37
    C6→L1 Conductivity = (20.92, 53.87) Loss = (0.0, 15.0) 0.18 1.00 1.82

     | Show Table
    DownLoad: CSV

    The analysis of small molecular saccharides, including fructose, glucose, saccharose and maltose, revealed that fructose and glucose had a strong association with the loss rate. However, the saccharose and maltose contents had no significant effects. Fructose content was brought into the front itemset, and loss rate into the rear itemset. Table 4 and Figure 8 depicted association rules meeting the requirement. In terms of the fructose content, the rules from strong to weak were as follow: F1→L1 = F3→L1 > F5→L2 > F2→L1 > F6→L3 > F4→L1. The result showed that the loss rate increased with increased fructose content. When the fructose content was more than 20.35 mg/g, defluidization and sticky wall phenomenon occurred easily. Similarly, the loss rate greatly decreased when the fructose content was less than 20.35 mg/g. A fructose content of 20.35 mg/g might be a transition point impacting granulation feasibility similar to glucose, as shown in Figure 8(b).

    Table 4.  Association rules between the content of low molecular weight saccharides and loss rate.
    Factors Factor code Front itemset Rear itemset Support Confidence Lift
    Fructose F1→L1 Fructose = (0.00, 6.86) Loss = (0.0, 15.0) 0.16 0.89 1.62
    F2→L1 Fructose = (6.86, 10.33) Loss = (0.0, 15.0) 0.14 0.88 1.59
    F3→L1 Fructose = (10.33, 12.80) Loss = (0.0, 15.0) 0.16 0.89 1.62
    F4→L1 Fructose = (12.80, 20.35) Loss = (0.0, 15.0) 0.10 0.63 1.14
    F5→L2 Fructose = (20.35, 39.73) Loss = (15.0, 50.0) 0.14 0.88 3.19
    F6→L3 Fructose = (39.73,104.93) Loss = (50.0,100.0) 0.14 0.78 4.41
    Glucose G1→L1 Glucose = (0.00, 2.42) Loss = (0.0, 15.0) 0.16 0.89 1.62
    G2→L1 Glucose = (2.42, 7.13) Loss = (0.0, 15.0) 0.12 0.75 1.37
    G3→L1 Glucose = (7.13, 10.43) Loss = (0.0, 15.0) 0.14 0.78 1.42
    G4→L1 Glucose = (10.43, 12.42) Loss = (0.0, 15.0) 0.12 0.75 1.37
    G5→L2 Glucose = (12.42, 34.05) Loss = (15.0, 50.0) 0.10 0.63 2.28
    G6→L3 Glucose = (34.05,117.57) Loss = (50.0,100.0) 0.14 0.78 4.41

     | Show Table
    DownLoad: CSV
    Figure 8.  Association rules between (a) Fructose; (b) Glucose; (c) Protein and loss rate. (Notably, the confidence in the figure refers to the total confidence when there is a loss rate of over 15% due to undesired granulation processes).

    The association rules for glucose were consistent with those for fructose (Figure 8(b)). Higher saccharides content easily led to defluidization or sticky wall phenomenon, significantly impacting the granulate process.

    The protein content was brought into the front itemset, and the loss rate into the rear itemset. Table 5 illustrated the association rules meeting the requirement. The rules from strong to weak were as follows. P6→L1 > P4→L1 = P5→L1 > P1→L2 > P3→L1 > P2→L2. The loss rate decreased as the protein contents increased (Figure 8(c)).

    Table 5.  Association rules between protein content and loss rate.
    Factor code Front itemset Rear itemset Support Confidence Lift
    P1→L2 Protein = (0.29, 1.63) Loss = (15.0, 50.0) 0.12 0.67 2.43
    P2→L2 Protein = (1.63, 2.93) Loss = (15.0, 50.0) 0.10 0.63 2.28
    P3→L1 Protein = (2.93, 3.66) Loss = (0.0, 15.0) 0.12 0.67 1.21
    P4→L1 Protein = (3.66, 5.84) Loss = (0.0, 15.0) 0.12 0.75 1.37
    P5→L1 Protein = (5.84, 8.06) Loss = (0.0, 15.0) 0.12 0.75 1.37
    P6→L1 Protein = (8.06, 12.01) Loss = (0.0, 15.0) 0.16 0.89 1.62

     | Show Table
    DownLoad: CSV

    Regarding physical properties, association rules indicated that increasing Tg promotes a smooth granulation process. When the material temperature during granulation is 40 ± 2℃, there is a significant risk of defluidization and granulation failure if Tg is under 29.04℃. Similarly, when Tg ranges from 29.04 to 53.80℃, there is a great risk of forming larger aggregates or sticking to the wall, resulting in a higher loss rate. Previous research has shown that for a given rigid condition, temperatures for sticky conditions range from 20 to 30℃ above Tg attributed to the amorphous components [43]. One possible mechanism explanation for these results is that when the temperature exceeds the Tg of the amorphous material by more than 10℃, it transitions into a rubbery state with increased adhesion. It leads to the formation of rubbery bridges between particles and causing wet mass or collapse and over-granulation due to the formation of large agglomerates. Adding excipients with high glass transition temperature to materials with lower glass transition temperature can improve the yield and reduce the stickiness by increasing the Tg of the original liquid [44]. It is in agreement with the results obtained in this study. The DST was another critical parameter that affected FBG. The results showed that a lower DST was conducive to effective FBG. Cheng et al. [35] found that, by analyzing the DST of the feed solution and the surface chemical elements of the powder, the addition of HPMC can significantly reduce sticking and improve the yield due to its surface activity, reducing the DST and achieving an anti-sticking effect. It is consistent with the results of this study. Additionally, conductivity was another vital parameter affecting FBG. The results showed that the loss rate decreased with the decrease in conductivity. However, further investigation is required to understand the reason behind this phenomenon deeply.

    In terms of chemical properties, the result showed that the loss rate increased with the increase in the contents of low molecular weight saccharides, especially fructose. A 20.35 mg/g fructose content might be critical to granulation feasibility. One possible mechanism explaining these results is attributed to the soluble and sticky characteristics of sugars. These properties lead to the formation of viscous liquid bridges, contributing to sticky behavior or a larger wet mass. Importantly, they adhere easily to the inner wall and nozzle, often resulting in over granulation. The same conclusion was obtained in Liu's study [45].

    Additionally, the protein content was another important parameter. The results showed that higher protein contents were conducive to effective FBG. The mechanism of spray drying encapsulation technology might explain this result. High loss rates of feed solutions due to the low Tg or uncontrolled stickiness are severe problems with high contents of small molecule sugars, acids or phenolic compounds [46]. Thus, utilizing protein as the wall material enables the rapid formation of a glassy layer with a high Tg on the surface. This layer exhibits surfactant and film-forming agent characteristics, effectively preventing excessive adherence, reducing loss and minimizing hygroscopicity [47]. In addition to that, it also prevents the deterioration of phenolic compounds, extending shelf life and minimizing bitterness and astringency [48]. State-of-the-art research regarding plant proteins has shown their potential as natural ingredients due to their less allergenic structure and functionality.

    In this study, 11 physical properties and 10 chemical properties were comprehensively determined. It was done utilizing the RF and association algorithms based on data mining to explore the relationship between physicochemical characteristics and the process feasibility of FBG. RF algorithm identified the top 8 important physicochemical parameters such as Tg, DST100ms, DST1000ms, DST10ms and conductivity. Furthermore, chemical properties such as fructose content, glucose content and protein content were also identified. The association algorithm revealed that Tg was the most critical factor affecting the feasibility of FBG among all physical parameters in this study. Moreover, for a bed temperature higher than 10℃ above the Tg, there was a high possibility of bed collapse or wall sticking. The higher the DST, the higher the loss rate, and DST10ms, DST100ms and DST1000ms showed a similar trend, while conductivity had an opposite trend. Regarding chemical compositions, low molecular weight saccharides and protein exhibited different trends. A higher content of the low molecular weight saccharides resulted in a greater impact on loss rate. In particular, a 20.35 mg/g content in feed solution might be a transition point impacting granulation feasibility, while protein contents showed an opposite trend.

    Data mining is useful for investigating the association between physicochemical characteristics and the feasibility of FBG by uncovering hidden rules. Overall, based on the RF and Apriori algorithm approaches, the established association rules were beneficial for better understanding the process by controlling material properties and providing valuable guidance for improving FBG-based product development.

    These phenomena depend on the combination of various physicochemical properties and process parameters. However, this work still has limitations, as only physicochemical properties were used as influencing factors. Further research should be carried out to determine more influential variables on the granule growth mechanism from a broader perspective and to comprehensively develop a control strategy for FBG. This part of the research is currently in progress.

    The authors declare they have not used Artificial Intelligence (AI) tools in the creation of this article.

    This research is supported by the Scientific and technological innovation project of China Academy of Chinese Medical Sciences (CI2021A04301), National Key Research and Development Program (2022YFC3501900) and Fundamental Research Funds for the Central Public Welfare Research Institutes (ZXKT21012, ZZ13-YQ-059). The author thanks co-authors for Software, Validation, Formal Analysis, Investigation and Visualization of the manuscript.

    The authors declare there is no conflict of interest.

    [1] Watt M, Kirkegaard JA, Passioura JB (2006) Rhizosphere biology and crop productivity-a review. Soil Res 44: 299–317. doi: 10.1071/SR05142
    [2] Tahat MM, Sijam K (2012) Arbuscular mycorrhizal fungi and plant root exudates bio-communications in the rhizosphere. Afr J Microbiol Res 6: 7295–7301. doi: 10.5897/AJMR12.2250
    [3] Miransari M (2011) Interactions between arbuscular mycorrhizal fungi and soil bacteria. Appl Microbiol Biot 89: 917–930. doi: 10.1007/s00253-010-3004-6
    [4] Schüβler A, Walker C (2010) The Glomeromycota: A species list with new families and new genera. Libraries at the Royal Botanic Garden Edinburgh, Kew, Botanische Staatssammlung Munich and Oregon State University. Available from: www.amf-phylogeny.com.
    [5] Velázquez S, Cabello M (2011) Occurrence and diversity of arbuscular mycorrhizal fungi in trap cultures from El Palmer National Park soils. Eur J Soil Biol 47: 230–235. doi: 10.1016/j.ejsobi.2011.05.002
    [6] Veresoglou SD, Chen B, Rillig MC (2012) Arbuscular mycorrhiza and soil nitrogen cycling. Soil Biol Biochem 46: 53–62. doi: 10.1016/j.soilbio.2011.11.018
    [7] Lioussanne L, Perreault F, Jolicoeur M, et al. (2010) The bacterial community of tomato rhizosphere is modified by inoculation with arbuscular mycorrhizal fungi but unaffected by soil enrichment with mycorrhizal root exudates or inoculation with Phytophthora nicotianae. Soil Biol Biochem 42: 473–483. doi: 10.1016/j.soilbio.2009.11.034
    [8] Vazquez MM, Cesar S, Azcon R, et al. (2000) Interactions between arbuscular mycorrhizal fungi and other microbial inoculants (Azospirillum, Pseudomonas, Trichoderma) and their effects on microbial population and enzyme activities in the rhizosphere of maize plants. Appl Soil Ecol 15: 261–272. doi: 10.1016/S0929-1393(00)00075-5
    [9] Bona E, Lingua G, Manassero P, et al. (2015) AM fungi and PGP pseudomonads increase flowering, fruit production, and vitamin content in strawberry grown at low nitrogen and phosphorus levels. Mycorrhiza 25: 181–193. doi: 10.1007/s00572-014-0599-y
    [10] Lazcano C, Barrios-Masias FH, Jackson LE (2014) Arbuscular mycorrhizal effects on plant water relations and soil greenhouse gas emissions under changing moisture regimes. Soil Biol Biochem 74: 184–192. doi: 10.1016/j.soilbio.2014.03.010
    [11] du Jardin P (2015) Plant biostimulants: Definition, concept, main categories and regulation. Sci Hortic 196: 3–14. doi: 10.1016/j.scienta.2015.09.021
    [12] Rouphael Y, Cardarelli M, Colla G (2015)Role of arbuscular mycorrhizal fungi in alleviating the adverse effects of acidity and aluminium toxicity in zucchini squash. Sci Hortic 188: 97–105.
    [13] Rouphael Y, Cardarelli M, di Mattia E, et al. (2010) Enhancement of alkalinity tolerance in two cucumber genotypes inoculated with an arbuscular mycorrhizal biofertilizer containing Glomus intraradices. Biol Fertil Soils 46: 499–509. doi: 10.1007/s00374-010-0457-9
    [14] Inderjit (1996) Plant phenolics in allelopathy. Bot Rev 62: 186–202. doi: 10.1007/BF02857921
    [15] Vokou D (2007) Allelochemicals, allelopathy and essential oils: A field in search of definitions and structure. Allelopathy J 19: 119–135.
    [16] Papatheodorou EM, Margariti C, Vokou D (2014) Effects of the two carvone enantiomers on soil enzymes involved in C, P and N cycles. J Biol Res-Thessaloniki 21: 7. doi: 10.1186/2241-5793-21-7
    [17] Kadoglidou K, Lagopodi A, Karamanoli K, et al. (2011) Inhibitory and stimulatory effects of essential oils and individual monoterpenoids on growth and sporulation of four soil-borne fungal isolates of Aspergillus terreus, Fusarium oxysporum, Penicillium expansum, and Verticillium dahlia. Eur J Plant Pathol 130: 297–309. doi: 10.1007/s10658-011-9754-x
    [18] Rasoul MAA, Marei GIK, Abdelgaleil SAM (2012) Evaluation of antibacterial properties and biochemical effects of monoterpenes on plant pathogenic bacteria. Afr J Microbiol Res 6: 3667–3672.
    [19] Vokou D, Chalkos D, Karamanlidou G, et al. (2002) Activation of soil respiration and shift of the microbial population balance in soil as a response to Lavandula stoechas essential oil. J Chem Ecol 28: 755–768. doi: 10.1023/A:1015236709767
    [20] Hassiotis CN (2010) Evaluation of essential oil antifungal activity against mycorrhizal fungi-the case of Laurus nobilis essential oil. Isr J Ecol Evol 56: 35–54. doi: 10.1560/IJEE.56.1.35
    [21] Hassiotis CN, Dina EI (2011) The effects of laurel (Laurus nobilis L.) on development of two mycorrhizal fungi. Int Biodeter Biodegr 65: 628–634. doi: 10.1016/j.ibiod.2011.03.006
    [22] Pino O, Sanchez Y, Rojas MM (2013) Plant secondary metabolites as an alternative in pest management. I: background, research approaches and trends. Revista De Proteccion Vegetal 28: 81–94.
    [23] Kouassi KH, Bajji M, Zhiri A, et al. (2010) Evaluation of three essential oils as potential sources of botanical fungicides. Commun Agr Appl Biol Sci 75: 525–529.
    [24] Wang MY, Xia RX, Wu QS, et al. (2007) Influence of arbuscular mycorrhizal fungi on microbes and enzymes of soils from different cultivated densities of red clover. Ann Microbiol 57: 1–7. doi: 10.1007/BF03175042
    [25] Nottingham AT, Turner BL, Winter K, et al. (2013) Root and arbuscular mycorrhizal mycelial interactions with soil microorganisms in lowland tropical forest. FEMS Microbiol Ecol 85: 37–50. doi: 10.1111/1574-6941.12096
    [26] Garcia-Garrido J, Vierheiling H (2009) From a germinating spore to an established arbuscular mycorrhiza, In: Khasa D, Piche Y, Coughlan A, Advances in mycorrhizal science and technologies, Council National Research of Canada.
    [27] Seddas PMA, Arias CM, Arnould C, et al. (2009) Symbiosis-related plant genes modulate molecular responses in an arbuscular mycorrhizal fungus during early root interactions. Mol Plant Microbe In 22: 341–351. doi: 10.1094/MPMI-22-3-0341
    [28] Larose G, Chênevert R, Moutoglis P, et al. (2002) Flavonoid levels in roots of Medicago sativa are modulated by the developmental stage of the symbiosis and the root colonizing arbuscular mycorrhizal fungus. J Plant Physiol 159: 1329–1339. doi: 10.1078/0176-1617-00896
    [29] Piotrowski JS, Morford SL, Rillig MC (2008) Inhibition of colonization by a native arbuscular mycorrhizal fungal community via Populus trichocarpa litter, litter extract, and soluble phenolic compounds. Soil Biol Biochem 40: 709–717. doi: 10.1016/j.soilbio.2007.10.005
    [30] Al-Tawaha A, Al-Karaki G, Massadeh A (2013) Comparative response of essential oil composition, antioxidant activity and phenolic contents spearmint (Mentha spicata L.) under protected soilless vs. open field. Adv Environ Biol 7: 902–910.
    [31] Bimakr M, Rahman RA, Ganjloo A, et al. (2011) Optimization of supercritical carbon dioxide extraction of bioactive flavonoid compounds from spearmint (Mentha spicata L.) leaves by using response surface methodology. Food Bioprocess Tech 5: 912–920.
    [32] Chowdhury JU, Nandi NC, Uddin M, et al. (2007) Chemical constituents of essential oils from two types of spearmint (Mentha spicata L. and M. cardiaca L.) introduced in Bangladesh. Bangl J Sci Ind Res 42: 79–82.
    [33] Smith SE, Smith FA (2011) Roles of arbuscular mycorrhizas in plant nutrition and growth: new paradigms from cellular to ecosystem scales. Ann Rev Plant Biol 62: 227–250. doi: 10.1146/annurev-arplant-042110-103846
    [34] Maya MA, Matsubara Y (2013) Tolerance to Fusarium wilt and anthracnose diseases and changes of antioxidative activity in mycorrhizal cyclamen. Crop Prot 47: 41–48. doi: 10.1016/j.cropro.2013.01.007
    [35] Yang H, Dai Y, Wang X, et al. (2014) Meta-analysis of interactions between arbuscular mycorrhizal fungi and biotic stressors of plants. Sci World J 16: 746506.
    [36] Vokou D, Margaris N, Lynch J (1984) Effects of volatile oils from aromatic shrubs on soil microorganisms. Soil Biol Biochem 16: 509–513. doi: 10.1016/0038-0717(84)90060-9
    [37] Koske RE, Gemma JN (1989) A modified procedure for staining roots to detect VA mycorrhizas. Mycol Res 92: 486–488. doi: 10.1016/S0953-7562(89)80195-9
    [38] Orfanoudakis M, Wheeler CT, Hooker JE (2010) Both the arbuscular mycorrhizal fungus Gigaspora rosea and Frankia increase root system branching and reduce root hair frequency in Alnus glutinosa. Mycorrhiza 20: 117–126. doi: 10.1007/s00572-009-0271-0
    [39] Trouvelot A, Kough J, Gianinazzi-Pearson V (1986) Mesure du taux de mycorrhization d'un systeme radiculaire recherché de methods d'estimation ayant une signification fonctionnelle, In: Gininazzi-Pearson V, Giainazzi S, Physiological and genetical aspects of mycorrhiza, Paris: INRA Publications, 217–221.
    [40] Allison SD, Jastrow JD (2006) Activities of extracellular enzymes in physically isolated fractions of restored grassland soils. Soil Biol Biochem 38: 3245–3256. doi: 10.1016/j.soilbio.2006.04.011
    [41] Sinsabaugh RL, Reynolds H, Long TM (2000) Rapid assay for amidohydrolase (urease) activity in environmental samples. Soil Biol Biochem 32: 2095–2097. doi: 10.1016/S0038-0717(00)00102-4
    [42] Tabatabai M (1994) Soil enzymes, In: Weaver R, Angles J, Bottomley P, Methods of Soil Analysis Part 2, Microbiological and Biochemical Properties, Madison: Soil Science Society of America, 775–833.
    [43] Acosta-Martínez V, Tabatabai MA (2000) Arylamidase activity of soils. Soil Sci Soc Am J 64: 215. doi: 10.2136/sssaj2000.641215x
    [44] Papadopoulou ES, Karpouzas DG, Menkissoglu-Spiroudi U (2011) Extraction parameters significantly influence the quantity and the profile of PLFAs extracted from soils. Microb Ecol 6: 704–714.
    [45] Spyrou IM, Karpouzas DG, Menkissoglu-Spiroudi U (2009) Do botanical pesticides alter the structure of the soil microbial community? Microb Ecol 58: 715–727. doi: 10.1007/s00248-009-9522-z
    [46] McKinley VL, Peacock AD, White DC (2005) Microbial community PLFA and PHB responses to ecosystem restoration in tallgrass prairie soils. Soil Biol Biochem 37: 1946–1958. doi: 10.1016/j.soilbio.2005.02.033
    [47] Myers RT, Zak DR, White DC, et al. (2001) Landscape-level patterns of microbial community composition and substrate use in upland forest ecosystems. Soil Sci Soc Am J 65: 359. doi: 10.2136/sssaj2001.652359x
    [48] Zak DR, Ringelberg DB, Pregitzer KS, et al. (1996) Soil microbial communities beneath Populus grandidentata crown under elevated atmospheric CO2. Ecol Appl 6: 257–262. doi: 10.2307/2269568
    [49] Rillig MC, Mummey DL, Ramsey PW, et al. (2006) Phylogeny of arbuscular mycorrhizal fungi predicts community composition of symbiosis-associated bacteria. FEMS Microbiol Ecol 57: 389–395. doi: 10.1111/j.1574-6941.2006.00129.x
    [50] Frostegård A, Tunlid A, Bååth E (1993) Phospholipid fatty acid composition, biomass, and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl Environ Microb 59: 3605–3617.
    [51] White D, Stair J, Ringelberg D (1996) Quantitative comparisons of in situ microbial biodiversity by signature biomarker analysis. J Ind Microbiol Biot 17: 185–196. doi: 10.1007/BF01574692
    [52] Smith GA, Nickels JS, Kerger BD, et al. (1986) Quantitative characterization of microbial biomass and community structure in subsurface material: a prokaryotic consortium responsive to organic contamination. Can J Microbiol 32: 104–111. doi: 10.1139/m86-022
    [53] Burrows R, Ahmed I (2007) Fungicide seed treatments minimally affect arbuscular-mycorrhizal fungal (AMF) colonization of selected vegetable crops. J Biol Sci 7: 417–420. doi: 10.3923/jbs.2007.417.420
    [54] Huang JC, Lai WA, Singh S, et al. (2013) Response of mycorrhizal hybrid tomato cultivars under saline stress. J Soil Sci Plant Nutr 13: 469–484.
    [55] Nogueira MA, Cardoso EJBN (2007) Phosphorus availability changes the internal and external endomycorrhizal colonization and affects symbiotic effectiveness. Sci Agr 64: 295–300. doi: 10.1590/S0103-90162007000300013
    [56] Zsögön A, Lambais MR, Benedito VA, et al. (2008) Reduced arbuscular mycorrhizal colonization in tomato ethylene mutants. Sci Agr 65: 259–267. doi: 10.1590/S0103-90162008000300006
    [57] Ortas I, Razzaghi S, Rafique M (2016) Arbuscular mycorrhizae: Effect of rhizosphere and relation with carbon nutrition, In: Choudhary DK, Varma A, Tuteja N, Plant-microbe interaction: An approach to sustainable agriculture, Springer Nature Singapore Pte Ltd, 125–154.
    [58] Baar J, Paradi I, Lucasen EC, et al. (2011) Molecular analysis of AMF diversity in aquatic macrophytes: a comparison of oligotrophic and ultra-oligotrophic lakes. Aquat Bot 94: 53–61. doi: 10.1016/j.aquabot.2010.09.006
    [59] Christensen H, Jakobsen I (1993) Reduction of bacterial growth by a vesicular-arbuscular mycorrhizal fungus in the rhizosphere of cucumber (Cucumis sativus L.). Biol Fertil Soils 1: 253–258.
    [60] Zarea M, Ghalavand A, Goltapeh M, et al. (2009) Role of clover species and AM Fungi (Glomus mosseae) on forage yield, nutrients uptake, nitrogenase activity and soil microbial biomass. J Agr Tech 5: 337–347.
    [61] Ladygina N, Henry F, Kant MR, et al. (2010) Additive and interactive effects of functionally dissimilar soil organisms on a grassland plant community. Soil Biol Biochem 42: 2266–2275. doi: 10.1016/j.soilbio.2010.08.027
    [62] Finlay RD (2008) Ecological aspects of mycorrhizal symbiosis: with special emphasis on the functional diversity of interactions involving the extraradical mycelium. J Exp Bot 59: 1115–1126. doi: 10.1093/jxb/ern059
    [63] Acosta-Martínez V, Cruz L, Sotomayor-Ramírez D, et al. (2007) Enzyme activities as affected by soil properties and land use in a tropical watershed. Appl Soil Ecol 35: 35–45. doi: 10.1016/j.apsoil.2006.05.012
    [64] Vierheilig H, Alt M, Mohr U, et al. (1994) Ethylene biosynthesis and activities of chitinase and β-1,3-glucanase in the roots of host and non-host plants of vesicular-arbuscular mycorrhizal fungi after inoculation with Glomus mosseae. J Plant Physiol 143: 337–343. doi: 10.1016/S0176-1617(11)81641-X
    [65] Wang Y, Lin XG, Yin R, et al. (2006) Effects of arbuscular mycorrhizal inoculation on the growth of Elsholtzia splendens and Zea mays and the activities of phosphatase and urease in a multi-metal-contaminated soil under unsterilized conditions. Appl Soil Ecol 31: 110–119. doi: 10.1016/j.apsoil.2005.03.002
    [66] Huang H, Zhang S, Wu N, et al. (2009) Influence of Glomus etunicatum/Zea mays mycorrhiza on atrazine degradation, soil phosphatase and dehydrogenase activities, and soil microbial community structure. Soil Biol Biochem 41: 726–734. doi: 10.1016/j.soilbio.2009.01.009
    [67] Qian K, Wang L, Yin N (2012) Effects of AMF on soil enzyme activity and carbon sequestration capacity in reclaimed mine soil. Int J Min Sci Technol 22: 553–557. doi: 10.1016/j.ijmst.2012.01.019
    [68] Jin H, Liu J, Liu J, et al. (2012) Forms of nitrogen uptake, translocation, and transfer via arbuscular mycorrhizal fungi: A review. Sci China Life Sci 55: 474–482. doi: 10.1007/s11427-012-4330-y
    [69] Karamanoli K, Thalassinos G, Karpouzas D, et al. (2012) Are leaf glandular trichomes of oregano hospitable habitats for bacterial growth? J Chem Ecol 38: 476–485. doi: 10.1007/s10886-012-0117-7
    [70] Köllner EK, Carstens D, Keller E, et al. (2012) Bacterial chitin hydrolysis in two lakes with contrasting trophic statuses. Appl Environ Microb 78: 695–704. doi: 10.1128/AEM.06330-11
    [71] Stone MN, Plante AF, Casper BB (2013) Plant and nutrient controls on microbial functional characteristics in a tropical oxisol. Plant Soil 373: 893–905. doi: 10.1007/s11104-013-1840-8
    [72] Stainer R, Adelberg E, Ingraham J (1977) General Microbiology, London: Macmillan.
    [73] Cox SD, Mann CM, Markham JL, et al. (2000) The mode of antimicrobial action of the essential oil of Melaleuca alternifolia (tea tree oil). J Appl Microbiol 88: 170–175.
    [74] Prashar A, Hili P, Veness RG, et al. (2003) Antimicrobial action of palmarosa oil (Cymbopogon martinii) on Saccharomyces cerevisiae. Phytochemistry 63: 569–575. doi: 10.1016/S0031-9422(03)00226-7
    [75] Bach EM, Baera SG, Meyera CK, et al. (2010) Soil texture affects soil microbial and structural recovery during grassland restoration. Soil Biol Biochem 42: 2182–2191. doi: 10.1016/j.soilbio.2010.08.014
    [76] Averill C, Turner BL, Finzi AC (2014) Mycorrhiza-mediated competition between plants and decomposers drives soil carbon storage. Nature 505: 543–545. doi: 10.1038/nature12901
    [77] Kaiser C, Koranda M, Kitzler B, et al. (2010) Belowground carbon allocation by trees drives seasonal patterns of extracellular enzyme activities by altering microbial community composition in a beech forest soil. New Phytol 187: 843–858. doi: 10.1111/j.1469-8137.2010.03321.x
    [78] Cusack DF, Silver WL, Torn MS, et al. (2011) Changes in microbial community characteristics and soil organic matter with nitrogen additions in two tropical forests. Ecology 92: 621–632. doi: 10.1890/10-0459.1
    [79] Fragoeiro S, Magan N (2005) Enzymatic activity, osmotic stress and degradation of pesticide mixtures in soil extract liquid broth inoculated with Phanerochaete chrysosporium and Trametes versicolor. Environ Microbiol 7: 348–355. doi: 10.1111/j.1462-2920.2005.00699.x
    [80] Nannipieri P, Giagnoni L, Landi L, et al. (2011) Role of phosphatase enzymes in soil, In: Bünemann EK, Oberson A, Frossard E, Phosphorus in Action, Berlin Heidelberg: Springer, 215–243.
    [81] Závodská L, Lesn'y J (2006) Recent development in lignite investigation. HEJ Manuscript: 1418–7108.
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