Citation: Marzena Połaska, Barbara Sokołowska. Bacteriophages—a new hope or a huge problem in the food industry[J]. AIMS Microbiology, 2019, 5(4): 324-346. doi: 10.3934/microbiol.2019.4.324
[1] | Fangyuan Chen, Rong Yuan . Dynamic behavior of swine influenza transmission during the breed-slaughter process. Mathematical Biosciences and Engineering, 2020, 17(5): 5849-5863. doi: 10.3934/mbe.2020312 |
[2] | Zi Sang, Zhipeng Qiu, Xiefei Yan, Yun Zou . Assessing the effect of non-pharmaceutical interventions on containing an emerging disease. Mathematical Biosciences and Engineering, 2012, 9(1): 147-164. doi: 10.3934/mbe.2012.9.147 |
[3] | Rocio Caja Rivera, Shakir Bilal, Edwin Michael . The relation between host competence and vector-feeding preference in a multi-host model: Chagas and Cutaneous Leishmaniasis. Mathematical Biosciences and Engineering, 2020, 17(5): 5561-5583. doi: 10.3934/mbe.2020299 |
[4] | Yinggao Zhou, Jianhong Wu, Min Wu . Optimal isolation strategies of emerging infectious diseases with limited resources. Mathematical Biosciences and Engineering, 2013, 10(5&6): 1691-1701. doi: 10.3934/mbe.2013.10.1691 |
[5] | Robert Stephen Cantrell, Chris Cosner, Yuan Lou . Evolution of dispersal and the ideal free distribution. Mathematical Biosciences and Engineering, 2010, 7(1): 17-36. doi: 10.3934/mbe.2010.7.17 |
[6] | Fangyuan Chen, Rong Yuan . Reconsideration of the plague transmission in perspective of multi-host zoonotic disease model with interspecific interaction. Mathematical Biosciences and Engineering, 2020, 17(5): 4422-4442. doi: 10.3934/mbe.2020244 |
[7] | Kuang-Hui Lin, Yuan Lou, Chih-Wen Shih, Tze-Hung Tsai . Global dynamics for two-species competition in patchy environment. Mathematical Biosciences and Engineering, 2014, 11(4): 947-970. doi: 10.3934/mbe.2014.11.947 |
[8] | Ricardo López-Ruiz, Danièle Fournier-Prunaret . Complex Behavior in a Discrete Coupled Logistic Model for the Symbiotic Interaction of Two Species. Mathematical Biosciences and Engineering, 2004, 1(2): 307-324. doi: 10.3934/mbe.2004.1.307 |
[9] | S.A. Gourley, Yang Kuang . Two-Species Competition with High Dispersal: The Winning Strategy. Mathematical Biosciences and Engineering, 2005, 2(2): 345-362. doi: 10.3934/mbe.2005.2.345 |
[10] | Christian Cortés García . Bifurcations in discontinuous mathematical models with control strategy for a species. Mathematical Biosciences and Engineering, 2022, 19(2): 1536-1558. doi: 10.3934/mbe.2022071 |
In human history, over 70 % of the emerging infectious diseases are zoonoses, which mainly originate from animal reservoirs. Zoonotic pathogens can transmit from animals to humans. And about 75 % of these zoonotic pathogens originate from wildlife [28,3,24]. Wildlife, domestic animals and humans construct the network of pathogen transmission crossing the species barrier. Wildlife and domestic animals play important roles in the transmission of zoonotic pathogens, in spite of the fact that we always neglected them before a zoonosis emerging or reemerging [12,4].
No matter how well the science and technology developed in human society, human is just one kind of animals, even though other animals are not equal to humans in living status. The existence of the humans has changed the relationship between humans and animals due to some anthropogenic factors. Humans domesticated wolf, which was the ancestor of dog, for hunting about tens of thousands of years ago. Later, the intimacy between humans and dogs was increased more and more by natural selection or human selection, to be precise. In the meantime rabies virus existed permanently in human life by dog-human interface maintaining, as dogs were the mainly natural reservoirs of them, especially in Asia[24,32].
Animals are divided into wildlife and domestic animals by human selection [24]. Humans can manage domestic animals in their entire life, but they cannot control wildlife at liberty. At the same time, humans can contact with domestic animals sufficiently, but they have few opportunities to get in touch with wildlife except for some special professions, such as forest conservationists and poachers. As wildlife and domestic animals play different roles in human life, the zoonotic pathogen transmissions in wildlife infection, domestic animal infection and human infection would be in different styles [17,27]. Various mathematical models have been established in the study of zoonoses [26,1,16,31,11,29]. For example, Doctor Saenz and his partners discussed the impact of domestic animal-human interface in pathogen transmission [26] and Doctor Allen constructed several types of mathematical models to reflect the pathogen transmission in wildlife [1].
For pathogen transmission in multiple species, the multi-SIR model can be established as the form [1,17]:
$
{˙Si=Ai−n∑j=1βjiIjSi−μiSi,˙Ii=n∑j=1βjiIjSi−μiIi−γiIi−αiIi,˙Ri=γiIi−μiRi.
$
|
(1) |
The basic reproduction number
For wildlife, they are always the origin of animal-borne zoonoses [24,12]. The pathogen transmission from wildlife to humans is often neglected due to geographic distance between them, but the globalization and urbanization has shortened this distance. The linkage between wildlife and humans is established with anthropogenic land expanding[24]. And pathogens parasitized in different species could be transmitted to others crossing species barrier by this linkage. But for emerging zoonoses, wildlife play as the only role of natural reservoirs. The pathogen transmission from domestic animals to wildlife or from humans to wildlife could not cause emerging zoonoses. Because the pathogens parasitized in humans or domestic animals have already existed for a period of time, which could be not defined as an emerging event even if the pathogens might transmit back to humans. For example, Severe Acute Respiratory Syndromes (SARS) is defined as an emerging zoonosis, which originate from Rhinolophus, then transmit via palm civets as intermediate host to humans [8]. But for mycobacterium tuberculosis, taking humans as their reservoirs, it could not give rise to an emerging zoonosis even if it had opportunities to infect other animals [20].
That is to say, for wildlife, the zoonotic pathogens could transmit in them,
For the relationship between animals and humans, we assume that not all of people could have opportunities to be infected from animals. Live animals are the mainly origin of zoonotic pathogens and only part of people could contact with them including CAFO (Confined Animal Feeding Operation) workers and hunters [26]. We also take the human population heterogeneity into consideration in this paper. The human population is classified into two groups: high risk group and low risk group. High risk group has the opportunities to contact with infected animals sufficiently. But low risk group are the others. That is, high risk group can get pathogens from animals and humans, but low risk group from humans only. The emerging zoonotic pathogen transmission can be described in FIGURE 1.
Emerging zoonotic pathogen transmission from wildlife, to domestic animals, to humans can be described as the model (2).
$
{˙SW = AW−βWWIWSW−μWSW,˙IW=βWWIWSW−(μW+γW+αW)IW,˙RW=γWIW−μWRW,˙SD=AD−(βWDIW+βDDID)SD−μDSD,˙ID=(βWDIW+βDDID)SD−(γD+αD+μD)ID,˙RD=γDID−μDRD,˙SHH = AHH−[βWHIW+βDHID+βHH(IHH+ILH)]SHH−μHSHH,˙IHH=[βWHIW+βDHID+βHH(IHH+ILH)]SHH −(γH+αH+μH)IHH,˙RHH=γHIHH−μHRHH,˙SLH = ALH−βHH(IHH+ILH)SLH−μHSLH,˙ILH=βHH(IHH+ILH)SLH−(γH+αH+μH)ILH,˙RLH=γHILH−μHRLH.
$
|
(2) |
The basic model has been established to reflect the pathogen transmission from wildlife, to domestic animals, to humans as model (2). Next step, we take the isolation and slaughter strategies into consideration [22,23,8,31,2,25,18]. For wildlife, it is difficult to control them when a zoonosis is emerging. Lethal control, vaccination and fencing (physical barriers) are the primary approaches to limit the number of susceptibles in wildlife. In this paper, we take lethal control and fencing (physical barriers) as the strategies to compare the similar isolation and slaughter strategies in emerging zoonotic pathogen transmission.
$
{˙SW = AW−βWWIWSW−(μW+δS)SW,˙IW=βWWIWSW−(μW+γW+αW+δI)IW,˙RW=γWIW−(μW+δR)RW,˙SD=AD−((1−θD)βWDIW+βDDID)SD−μDSD,˙ID=((1−θD)βWDIW+βDDID)SD−(γD+αD+μD)ID,˙RD=γDID−μDRD,˙SHH = AHH−[(1−θH)βWHIW+βDHID+βHH(IHH+ILH)]SHH −μHSHH,˙IHH=[(1−θH)βWHIW+βDHID+βHH(IHH+ILH)]SHH −(γH+αH+μH)IHH,˙RHH=γHIHH−μHRHH,˙SLH = ALH−βHH(IHH+ILH)SLH−μHSLH,˙ILH=βHH(IHH+ILH)SLH−(γH+αH+μH)ILH,˙RLH=γHILH−μHRLH.
$
|
(3) |
For domestic animals, we can manage them in their entire lives. It is no need to slaughter all of the susceptibles in domestic animals. We can quarantine all of the domestic animals, then isolate susceptibles and slaughter infectives.
$
{˙SD=AD−(βWDIW+βDDID)SD−μDSD,˙ID=(βWDIW+βDDID)SD−(γD+αD+μD+ΔI)ID,˙RD=γDID−μDRD,˙SHH = AHH−[βWHIW+(1−ΘH)βDHID+βHH(IHH+ILH)]SHH −μHSHH,˙IHH=[βWHIW+(1−ΘH)βDHID+βHH(IHH+ILH)]SHH −(γH+αH+μH)IHH,˙RHH=γHIHH−μHRHH,˙SLH = ALH−βHH(IHH+ILH)SLH−μHSLH,˙ILH=βHH(IHH+ILH)SLH−(γH+αH+μH)ILH,˙RLH=γHILH−μHRLH.
$
|
(4) |
For humans, we could not 'slaughter' anyone no matter how serious they were infected with some kind of zoonoses. The quarantine and isolation may be the best method to limit the pathogen transmission except for vaccination. But the effect of quarantine and isolation strategies in humans are different from animals. For taking isolation strategies in animals, it is the susceptible humans, who are afraid of getting infected, to take the initiative and get away from susceptible animals. So the per capita incidence rate from animals to humans,
$
{˙SHH = AHH−[βWHIW+βDHID+βHH(IHH+ILH)]SHH −μHSHH−φ(I)SHH+γH1OHH1,˙OHH1=φ(I)SHH−γH1OHH1−μHOHH1,˙IHH=[βWHIW+βDHID+βHH(IHH+ILH)]SHH −(γH+αH+μH+σ)IHH,˙OHH2=σIHH−γH2OHH2−μHOHH2,˙RHH=γHIHH+γH2OHH2−μHRHH,˙SLH = ALH−βHH(IHH+ILH)SLH−μHSLH −φ(I)SLH+γH1OLH1,˙OLH1=φ(I)SLH−γH1OLH1−μHOLH1,˙ILH=βHH(IHH+ILH)SLH−(γH+αH+μH+σ)ILH,˙OLH2=σILH−γH2OLH2−μHOLH2,˙RLH=γHILH+γH2OLH2−μHRLH.
$
|
(5) |
In conclusion, we can get the isolation and slaughter strategies controlling model by (3), (4) and (5) in wildlife, domestic animals and humans as the form:
$
{˙SW = AW−βWWIWSW−(μW+εWδS)SW,˙IW=βWWIWSW−(μW+γW+αW+εWδI)IW,˙RW=γWIW−(μW+εWδR)RW,˙SD=AD−((1−εWθD)βWDIW+βDDID)SD−μDSD,˙ID=((1−εWθD)βWDIW+βDDID)SD −(γD+αD+μD+εDΔI)ID,˙RD=γDID−μDRD,˙SHH = AHH−[(1−εWθH)βWHIW+(1−εDΘH)βDHID+βHH(IHH +ILH)]SHH−μHSHH−εHφ(I)SHH+γH1OHH1,˙OHH1=εHφ(I)SHH−γH1OHH1−μHOHH1,˙IHH=[(1−εWθH)βWHIW+(1−εDΘH)βDHID +βHH(IHH+ILH)]SHH−(γH+αH+μH+εHσ)IHH,˙OHH2=εHσIHH−γH2OHH2−μHOHH2,˙RHH=γHIHH+γH2OHH2−μHRHH,˙SLH = ALH−βHH(IHH+ILH)SLH−μHSLH −εHφ(I)SLH+γH1OLH1,˙OLH1=εHφ(I)SLH−γH1OLH1−μHOLH1,˙ILH=βHH(IHH+ILH)SLH−(γH+αH+μH+εHσ)ILH,˙OLH2=εHσILH−γH2OLH2−μHOLH2,˙RLH=γHILH+γH2OLH2−μHRLH.
$
|
(6) |
with Strategy 1,
$
{εW=0,ILH+IHH<IWCεW=1,ILH+IHH≥IWC
$
|
(7) |
Strategy 2,
$
{εD=0,ILH+IHH<IDCεD=1,ILH+IHH≥IDC
$
|
(8) |
Strategy 3,
$
{εH=0,ILH+IHH<IHCεH=1,ILH+IHH≥IHC
$
|
(9) |
The feasible set
Total number of wildlife is
It is difficult for us to take any strategies to control emerging zoonoses in first time. Only the infected of numbers of people would cause our attention to take some strategies to control the infectious disease. So it is assumed that if the number of infectives in human including high risk group and low risk group reached a threshold at
With
In (2), the wildlife class can be separated as
$
{˙SW = AW−βWWIWSW−μWSW,˙IW=βWWIWSW−μWIW−γWIW−αWIW.
$
|
(10) |
We can get the basic reproductive number in wildlife
The disease-free equilibrium is
Theorem 2.1. If
Proof. The next generation matrix of the vector field corresponding to system (10) at
${J_W}({E_{0(W)}}) = \left( {−μW−βWWAWμW0βWWAWμW−μW−γW−αW } \right)$
|
If
Similarly, the next generation matrix at
${J_W}(E_{(W)}^*) = \left( {−βWWˆIW−μW−βWWˆSWβWWˆIWβWWˆSW−μW−γW−αW } \right)$
|
The characteristic equation of
$fW(λ)=λ2+AWβWWμW+γW+αWλ+μW(μW+γW+αW)(AWβWWμW(μW+γW+αW)−1)=0
$
|
If
In (2), the wildlife and domestic animals classes can be separated as
$
{˙SW = AW−βWWIWSW−μWSW,˙IW=βWWIWSW−μWIW−γWIW−αWIW,˙SD = AD−βWDIWSD−βDDIDSD−μDSD,˙ID=βWDIWSD+βDDIDSD−γDID−αDID−μDID.
$
|
(11) |
We can get the basic reproductive number in domestic animals is
The disease-free equilibrium is
Theorem 2.2. If
Proof. There always exists
${J_{WD}}({E_{0(WD)}}) = \left( {JW(E0(W))0∗JD(E0(D)) } \right)$
|
with
${J_D}({E_{0(D)}}) = \left( {−μD−βDDADμD0βDDADμD−μD−γD−αD } \right)$
|
If
In (11), the epidemic equilibrium
$ {A_W} - {\beta _{WW}}{\hat I_W}{\hat S_W} - {\mu _W}{\hat S_W}{\text{ = }}0 $ | (12) |
$ {\beta _{WW}}{\hat I_W}{\hat S_W} - {\mu _W}{\hat I_W} - {\gamma _W}{\hat I_W} - {\alpha _W}{\hat I_W}{\text{ = }}0 $ | (13) |
$ {A_D} - {\beta _{WD}}{\hat I_W}{\hat S_D} - {\beta _{DD}}{\hat I_D}{\hat S_D} - {\mu _D}{\hat S_D}{\text{ = }}0 $ | (14) |
$ {\beta _{WD}}{\hat I_W}{\hat S_D} + {\beta _{DD}}{\hat I_D}{\hat S_D} - {\mu _D}{\hat I_D} - {\gamma _D}{\hat I_D} - {\alpha _D}{\hat I_D}{\text{ = }}0 $ | (15) |
From (12), (13), (14), (15), we can get
${\hat S_W} = \frac{{{\mu _W} + {\gamma _W} + {\alpha _W}}}{{{\beta _{WW}}}}$ |
${\hat I_W} = \frac{{{\mu _W}}}{{{\beta _{WW}}}}(\frac{{{A_W}{\beta _{WW}}}}{{{\mu _W}({\mu _W} + {\gamma _W} + {\alpha _W})}} - 1)$ |
$ˆID = βWDˆIWˆSDμD+γD+αD−βDDˆSD=βWDˆSDμD+γD+αD−βDDˆSD×μWβWW(AWβWWμW(μW+γW+αW)−1) $
|
and
$ \hat S_D = \frac{1}{{2{\mu _D}{\beta _{DD}}}} \nonumber [ {{A_D}{\beta _{DD}} + ({\mu _D} + {\gamma _D} + {\alpha _D})({\mu _D} + {\beta _{WD}}{{\hat I}_W})} ] \\ \nonumber - \frac{1}{{2{\mu _D}{\beta _{DD}}}} [ A_D^2\beta _{DD}^2 + 2{A_D}{\beta _{DD}}({\mu _D} + {\gamma _D} + {\alpha _D})({\beta _{WD}}{{\hat I}_W}\\ - {\mu _D}) + {{({\mu _D} + {\gamma _D} + {\alpha _D})}^2}{{({\mu _D} + {\beta _{WD}}{{\hat I}_W})}^2} ]^\frac{1}{2} $ |
So if
In fact, for
$g1(ˆSD)=μDβDDˆSD2−[ADβDD+(μD+γD+αD)(μD+βWDˆIW)]ˆSD+AD(μD+γD+αD)=0 $
|
If
So we choose
$ \hat S_D = \frac{1}{{2{\mu _D}{\beta _{DD}}}} \nonumber [ {{A_D}{\beta _{DD}} + ({\mu _D} + {\gamma _D} + {\alpha _D})({\mu _D} + {\beta _{WD}}{{\hat I}_W})} ] \\ \nonumber - \frac{1}{{2{\mu _D}{\beta _{DD}}}} [ A_D^2\beta _{DD}^2 + 2{A_D}{\beta _{DD}}({\mu _D} + {\gamma _D} + {\alpha _D})({\beta _{WD}}{{\hat I}_W}\\- {\mu _D}) + {{({\mu _D} + {\gamma _D} + {\alpha _D})}^2}{{({\mu _D} + {\beta _{WD}}{{\hat I}_W})}^2} ]^\frac{1}{2} $ |
to guarantee
The next generation matrix at
${J_{WD}}(E_{(WD)}^*) = \left( {JW(E∗(W))0∗JD(E∗(D)) } \right)$
|
with
${J_D}(E_{(D)}^*) = \left( {−βWDˆIW−βDDˆID−μD−βDDˆSDβWDˆIW+βDDˆIDβDDˆSD−μD−γD−αD } \right)$
|
The characteristic equation of
If
In conclusion, if
The human class in (2) can be separated as the form:
$
{˙SHH = AHH−βWHIWSHH−βDHIDSHH−βHH(IHH+ILH)SHH −μHSHH,˙IHH=βWHIWSHH+βDHIDSHH+βHH(IHH+ILH)SHH−γHIHH −αHIHH−μHIHH,˙SLH = ALH−βHH(IHH+ILH)SLH−μHSLH,˙ILH=βHH(IHH+ILH)SLH−γHILH−αHILH−μHILH.
$
|
(16) |
There always exists disease-free equilibrium
The next generation matrix at
${J_{WDH}}({E_{0(WDH)}}) = \left( {JW(E0(W))00∗JD(E0(D))0∗∗JH(E0(H)) } \right)$
|
with
$JH(E0(H))=(−μH−βHHAHHμH0−βHHAHHμH0βHHAHHμH−μH−γH−αH0βHHAHHμH0−βHHALHμH−μH−βHHALHμH0βHHALHμH0βHHALHμH−μH−γH−αH) $
|
The characteristic equation of
If there is
At the same time, the spectral radius of
Theorem 2.3. If
Proof. The next generation matrix at
${J_{WDH}}({E_{0(WDH)}}) = \left( {JW(E0(W))00∗JD(E0(D))0∗∗JH(E0(H)) } \right).$
|
If
Next we prove the existence of epidemic equilibrium
In (16), the epidemic equilibrium
$ {{\text{A}}_{HH}} - {\beta _{WH}}{\hat I_W}{\hat S_{HH}} - {\beta _{DH}}{\hat I_D}{\hat S_{HH}} - {\beta _{HH}}({\hat I_{HH}} + {\hat I_{LH}}){\hat S_{HH}} - {\mu _H}{\hat S_{HH}}{\text{ = }}0 $ | (17) |
$
βWHˆIWˆSHH+βDHˆIDˆSHH+βHH(ˆIHH+ˆILH)ˆSHH−γHˆIHH−αHˆIHH−μHˆIHH = 0
$
|
(18) |
$ {{\text{A}}_{LH}} - {\beta _{HH}}({\hat I_{HH}} + {\hat I_{LH}}){\hat S_{LH}} - {\mu _H}{\hat S_{LH}}{\text{ = }}0 $ | (19) |
$ {\beta _{HH}}({\hat I_{HH}} + {\hat I_{LH}}){\hat S_{LH}} - {\gamma _H}{\hat I_{LH}} - {\alpha _H}{\hat I_{LH}} - {\mu _H}{\hat I_{LH}}{\text{ = }}0 $ | (20) |
From (17) + (19), (18) + (20), we get
$
AHH+ALH−βWHˆIWˆSHH−βDHˆIDˆSHH−βHH(ˆIHH+ˆILH)(ˆSHH+ˆSLH)−μH(ˆSHH+ˆSLH) = 0
$
|
(21) |
$
βWHˆIWˆSHH+βDHˆIDˆSHH+βHH(ˆIHH+ˆILH)(ˆSHH+ˆSLH)−(γH+αH+μH)(ˆIHH + ˆILH) = 0
$
|
(22) |
It is assumed that
Then we have
$ {{\text{A}}_{HH}} + {{\text{A}}_{LH}} - {\eta _S}{\beta _{WH}}{\hat I_W}{\hat S_H} - {\eta _S}{\beta _{DH}}{\hat I_D}{\hat S_H} - {\beta _{HH}}{\hat I_H}{\hat S_H} - {\mu _H}{\hat S_H}{\text{ = }}0 $ | (23) |
$ {\eta _S}{\beta _{WH}}{\hat I_W}{\hat S_H} + {\eta _S}{\beta _{DH}}{\hat I_D}{\hat S_H} + {\beta _{HH}}{\hat I_H}{\hat S_H} - ({\gamma _H} + {\alpha _H} + {\mu _H}){\hat I_H}{\text{ = }}0 $ | (24) |
From (23), (24), we can get
${\hat I_H}{\text{ = }}\frac{{{\eta _S}{\beta _{WH}}{{\hat I}_W}{{\hat S}_H} + {\eta _S}{\beta _{DH}}{{\hat I}_D}{{\hat S}_H}}}{{{\gamma _H} + {\alpha _H} + {\mu _H} - {\beta _{HH}}{{\hat S}_H}}}$ |
and
$\hat S_H = \frac{1}{2 \mu _H \beta _{HH}} \nonumber [ ( A_{HH}+A_{LH})\beta_{HH}+(\gamma _H + \alpha _H +\mu _H) (\mu _H + \eta _S \beta _{WH} {\hat I}_W \\ +\eta _S \beta _{DH} {\hat I}_D) ] \nonumber - \frac{1}{2 \mu _H \beta _{HH}} [ (A_{HH}+A_{LH})^2\beta_{HH}^2 + 2(A_{HH} +A_{LH})\beta_{HH}\\ (\gamma_H + \alpha_H + \mu_H) (\eta _S \beta _{WH} \hat I_W +\eta _S \beta _{DH} \hat I_D -\mu_H) +(\gamma_H + \alpha_H + \mu_H)^2 \nonumber \\ (\mu_H + \eta _S \beta _{WH} \hat I_W +\eta _S \beta _{DH} \hat I_D )^2 ]^\frac{1}{2} $ |
Similarly to the calculation of Theorem 2.2, we have
$g2(ˆSH)=μHβHHˆSH2+(AHH+ALH)(μH+γH+αH)−[(AHH+ALH)βHH+(μH+γH+αH)(μH+ηSβWHˆIW+ηSβDHˆID)]ˆSH=0 $
|
So if
${J_{WDH}}(E_{(WDH)}^*) = \left( {JW(E∗(W))00∗JD(E∗(D))0∗∗JH(E∗(H)) } \right)$
|
with
${J_H}(E_{(H)}^*) = \left( {J11−βHHˆSHH0−βHHˆSHHJ21J220βHHˆSHH0−βHHˆSLHJ33−βHHˆSLH0βHHˆSLHβHH(ˆIHH+ˆILH)J44 } \right)$
|
$ J_{11}=- {\beta _{WH}}{{\hat I}_W} - {\beta _{DH}}{{\hat I}_D} - {\beta _{HH}}({{\hat I}_{LH}} + {{\hat I}_{LH}}) - {\mu _H} $ |
$ J_{21}={\beta _{WH}}{{\hat I}_W} + {\beta _{DH}}{{\hat I}_D} + {\beta _{HH}}({{\hat I}_{LH}} + {{\hat I}_{LH}}) $ |
$ J_{22}={\beta _{HH}}{{\hat S}_{HH}} - {\gamma _H} - {\alpha _H} - {\mu _H} $ |
$ J_{33}=- {\beta _{HH}}({{\hat I}_{HH}} + {{\hat I}_{LH}}) - {\mu _H} $ |
$ J_{44}={\beta _{HH}}{{\hat S}_{LH}} - {\gamma _H} - {\alpha _H} - {\mu _H} $ |
The characteristic equation of
${f_{H2}}(\lambda ) = {\lambda ^4}{\text{ + }}{a_1}{\lambda ^3} + {a_2}{\lambda ^2}{\text{ + }}{a_3}\lambda {\text{ + }}{a_4} = 0$ |
with
${a_1} = \frac{{{A_{HH}}}}{{{{\hat S}_{HH}}}} + \frac{{{A_{LH}}}}{{{{\hat S}_{LH}}}} - {\beta _{HH}}({\hat S_{HH}} + {\hat S_{LH}}) + 2({\gamma _H} + {\alpha _H} + {\mu _H}),$ |
$a2=(AHHˆSHH+ALHˆSLH)(γH+αH+μH)−μHβHH(ˆSHH+ˆSLH)−β2HHˆSHHˆSLH+(AHHˆSHH+βWHˆIWˆIHHˆSHH+βDHˆIDˆIHHˆSHH+βHHˆILHˆIHHˆSHH)(ALHˆSLH+βHHˆIHHˆILHˆSLH), $
|
$a3=ALHˆSLH(AHHˆSHH+γH+αH+μH)(γH+αH+μH)−μHβHHˆSLH(AHHˆSHH+γH+αH+μH)−βHHˆSHHALHˆSLH(γH+αH+μH)+AHHˆSHH(ALHˆSLH+γH+αH+μH)(γH+αH+μH)−μHβHHˆSHH(ALHˆSLH+γH+αH+μH)−βHHˆSLHAHHˆSHH(γH+αH+μH), $
|
$a4=AHHˆSHHALHˆSLH(γH+αH+μH)2−μHβHH(ˆSHHALHˆSLH+ˆSLHAHHˆSHH)(γH+αH+μH) $
|
It is assumed that
In conclusion, if
From Theorem 2.1, Theorem 2.2 and Theorem 2.3, it is more difficult to satisfy the conditions to control emerging zoonoses with the number of susceptible species increasing. But if there was an epidemic in wildlife with
Next we take Strategy 1, Strategy 2 and Strategy 3 into consideration in order to compare the effects of different isolation and slaughter strategies in wildlife, domestic animals and humans on emerging zoonoses.
Strategy 1.
It is assumed that
$
{˙SW = AW−βWWIWSW−μWSW−δSW,˙IW=βWWIWSW−μWIW−γWIW−αWIW−δIW,˙RW=γWIW−μWRW−δRW,˙SD = AD−(1−θD)βWDIWSD−βDDIDSD−μDSD,˙ID=(1−θD)βWDIWSD+βDDIDSD−γDID−αDID−μDID,˙RD=γDID−μDRD,˙SHH = AHH−(1−θH)βWHIWSHH−βDHIDSHH−βHH(IHH +ILH)SHH−μHSHH,˙IHH=(1−θH)βWHIWSHH+βDHIDSHH+βHH(IHH+ILH)SHH −γHIHH−αHIHH−μHIHH,˙RHH=γHIHH−μHRHH,˙SLH = ALH−βHH(IHH+ILH)SLH−μHSLH,˙ILH=βHH(IHH+ILH)SLH−γHILH−αHILH−μHILH,˙RLH=γHILH−μHRLH.
$
|
(25) |
In (25), we get the control reproductive number in wildlife is
For the epidemic equilibrium of
Theorem 2.4. If
Strategy 2.
In (4), we get the control reproductive number in wildlife is
For the epidemic equilibrium of
In fact,
$
g3(ˆS2D)=μDβDD(ˆS2D)2−[ADβDD+(μD+γD+αD+ΔI)(μD+βWDˆIW)]ˆS2D+AD(μD+γD+αD+ΔI)=0
$
|
So we have
$
g3(ˆSD)=μDβDDˆSD2−[ADβDD+(μD+γD+αD+ΔI)(μD+βWDˆIW)]ˆSD+AD(μD+γD+αD+ΔI)
$
|
If
$
g1(ˆSD)=μDβDDˆSD2−[ADβDD+(μD+γD+αD)(μD+βWDˆIW)]ˆSD+AD(μD+γD+αD)=0 $
|
and
${A_D} - {\beta _{WD}}{\hat I_W}{\hat S_D} - {\beta _{DD}}{\hat I_D}{\hat S_D} - {\mu _D}{\hat S_D}{\text{ = }}0,$ |
we get
$g3(ˆSD)=[ADβDD+(μD+γD+αD)(μD+βWDˆIW)]ˆSD−AD(μD+γD+αD)−[ADβDD+(μD+γD+αD+ΔI)(μD+βWDˆIW)]ˆSD+AD(μD+γD+αD+ΔI)=−ΔI(μD+βWDˆIW)ˆSD+ΔIAD=ΔIβDDˆIDˆSD>0. $
|
Then we get
Theorem 2.5. If
Strategy 3.
If we took quarantine and isolation strategies in humans only, the impact of wildlife and domestic animals in human epidemic would be never changed comparing to no strategy. So we select the human epidemic model (26) from (5) for further analysis. At the same time, we choose
$
{˙SHH = AHH−βWHIWSHH−βDHIDSHH−βHH(IHH+ILH)SHH μHSHH−ρ(IHH+ ILH)SHH+γH1OHH1,˙OHH1=ρ(IHH+ ILH)SHH−γH1OHH1−μHOHH1,˙IHH=βWHIWSHH+βDHIDSHH+βHH(IHH+ILH)SHH −γHIHH−αHIHH−μHIHH−σIHH,˙OHH2=σIHH−γH2OHH2−μHOHH2,˙SLH = ALH−βHH(IHH+ILH)SLH−μHSLH−ρ(IHH+ ILH)SLH +γH1OLH1,˙OLH1=ρ(IHH+ ILH)SLH−γH1OLH1−μHOLH1,˙ILH=βHH(IHH+ILH)SLH−γHILH−αHILH−μHILH−σILH,˙OLH2=σILH−γH2OLH2−μHOLH2.
$
|
(26) |
We get the control reproductive number in humans is:
${R_{3(H)}} = \frac{{({A_{HH}} + {A_{LH}}){\beta _{HH}}}}{{{\mu _H}({\mu _H} + {\gamma _H} + {\alpha _H} + \sigma )}}$ |
Theorem 2.6. If
Strategies | no strategy | Strategy 1 | Strategy 2 | Strategy 3 |
Reproductive number in wildlife | | |||
Reproductive number in domestic animals | | | ||
Reproductive number in humans | | | ||
In this section we take avian influenza epidemic in China as an example to analyze the effects of different strategies on emerging zoonoses. Avian influenza is a kind of zoonoses, which have been prevalent in humans since 150 years ago. Avian influenza virus originated from aquatic birds, and it infected domestic birds by sharing watersheds. Humans can be infected by avian influenza virus via infected domestic birds[11,30,6,9]. But for birds, we cannot get the exact parameters to reflect the virus transmission clearly. So we take some similar data to estimate the process of avian influenza virus transmission approximately (TABLE 2).
Parameter | Definitions | Values | Sources |
birth or immigration rate of wild aquatic birds | 0.137 birds/day | Est. | |
| natural mortality rate of wild aquatic birds | 0.000137/day | [33] |
| recovery rate of wild aquatic birds | 0.25/day | Est. |
| disease-induced mortality rate of wild aquatic birds | 0.0025/day | Est. |
| birth or immigration rate of domestic birds | 48.72 birds/day | [33] |
| natural mortality rate of domestic birds | 0.0058/day | [33] |
| recovery rate of domestic birds | 0.25/day | [26] |
| disease-induced mortality rate of domestic birds | 0.0025/day | Est. |
| birth or immigration rate of humans | 0.07people/day | [23] |
| natural mortality rate of humans | 0.000035/day | [23] |
| recovery rate of humans | 0.33/day | [26, 31] |
| remove rate from isolation compartment to susceptible compartment. | 0.5/day | Est. |
| remove rate from isolation compartment to recovery individual compartment. | 0.5/day | Est. |
| disease-induced mortality rate of humans | 0.0033/day | Est. |
| basic reproductive number of wild aquatic birds | 2 | Est. |
| basic reproductive number of domestic birds | 2 | Est. |
| basic reproductive number of humans | 1.2 | [26] |
| per capita incidence rate from wild aquatic birds to domestic birds | Est. | |
| per capita incidence rate from wild aquatic birds to humans | Est. | |
| per capita incidence rate from domestic birds to humans | Est. |
The number of domestic birds is 4.2 times more than the number of humans in China [7], so we assume that the number of domestic birds is 8400 and the number of humans is 2000 to simplify the calculation. And it is assumed that there are about 1000 wild aquatic birds for no exact data found. And it is assumed that
The avian influenza virus transmission has been shown in model (2), which included wildlife, domestic animals, high risk group and low risk group [10,21,13]. For high risk group and low risk group in humans, there may be shown in different proportion in different areas. Less people are needed to take care of live animals in modern farming than tradition. Few people have opportunities to contact with live animals in some areas, which are the potential hosts of some pathogens in emerging zoonoses. But in some other areas, stock raising is the main economy origin of the residents. More people have to look after live animals to help support the family. The proportion of high risk group and low risk group is higher in these areas than others. Here we choose different proportions of high risk group and low risk group, such as 1:9, 1:3, 1:1, 3:1 and 9:1, to reflect emerging avian influenza prevalence in different areas (FIGURE 2).
From a to e in FIGURE 2, we get that more and more high proportion of humans are infected in the first 90 days. More people would be infected with higher proportion of them having the opportunity to contact with susceptible animals. From FIGURE 3, we get that the incidence rate on epidemic equilibrium is increasing with higher proportion of high risk group in humans. Although the proportion of high risk group in humans would never change the basic reproductive number, it could impact the final prevalence in humans.
The effects of parameters
From Ebola, Hendra, Marburg, SARS to H1N1, H7N9, more and more zoonotic pathogens come into humans. Tens of thousands of people have dead of these zoonoses in the last hundreds of years. Some public health policies have to be established to answer emerging or remerging zoonoses. For different species participating in an emerging zoonosis, different strategies should been taken for controlling. In this paper, we established model (3), model (4) and model (5) to reflect the effects of Strategy 1, Strategy 2 and Strategy3 about isolation and slaughter in emerging zoonoses respectively. Strategy 1 is the controlling measure for wildlife. Strategy 2 is the controlling measure for domestic animals. And Strategy 3 is the controlling measure for humans.
All of the three strategies would change the basic reproductive number to their own control reproductive number. The involvement of Strategy 1, Strategy 2 and Strategy 3 would change the conditions, which determine the zoonoses prevalence or not. At the same time, we conclude that the extinction of zoonoses must satisfy the conditions ensuring all of basic (control) reproductive numbers in different species are less than 1, whether it is taken controlling strategy or not. But if and only if basic (control) reproductive numbers in wildlife is more than 1, the zoonoses might be prevalent in all of the susceptible species.
The stability analysis on models in section 2 reflects the effects of three strategies on control reproductive numbers and equilibriums. In section 3, some numerical simulations show the effects of the three strategies on avian influenza epidemic in different areas in China at beginning. In this paper, we take isolation and slaughter strategies into consideration to study their effects on emerging zoonoses. But the other effective strategies like vaccination are neglected, which could be proposed in a forthcoming paper.
This work was supported by the National Natural Science Foundation of China (11371048).
[1] |
Hendrix WR (2002) Bacteriophages: evolution of the majority. Theor Popul Biol 61: 471–480. doi: 10.1006/tpbi.2002.1590
![]() |
[2] |
Hietala V, Horsma-Heikkinen J, Carron A, et al. (2019) The removal of endo- and enterotoxins from bacteriophage preparations. Front Microbiol 10: 1–9. doi: 10.3389/fmicb.2019.00001
![]() |
[3] |
Sarhan WA, Azzazy HM (2015) Phage approved in food, why not as a therapeutic? Expert Rev Anti Infect Ther 13: 91–101. doi: 10.1586/14787210.2015.990383
![]() |
[4] |
Górski A, Międzybrodzki R, Borysowski J, et al. (2012) Phage as a modulator of immune responses: practical implications for phage therapy. Adv Virus Res 83: 41–71. doi: 10.1016/B978-0-12-394438-2.00002-5
![]() |
[5] |
Wittebole X, Roock De S, Opa M (2014) Historical overview of bacteriophage therapy as an alternative to antibiotics for the treatment of bacterial pathogens. Virulence 5: 226–235. doi: 10.4161/viru.25991
![]() |
[6] |
Kazi M, Annapure US (2016) Bacteriophage biocontrol of foodborne pathogens. J Food Sci Technol 53: 1355–1362. doi: 10.1007/s13197-015-1996-8
![]() |
[7] |
Gilmore BF (2012) Bacteriophages as anti-infective agents: recent developments and regulatory challenges. Expert Rev Anti Infe Ther 10: 533–535. doi: 10.1586/eri.12.30
![]() |
[8] |
Fernández L, Gutiérrez D, Rodríguez A, et al. (2018) Application of bacteriophages in the agro-food sector: a long way toward approval. Front Cell Infect Microbiol 8: 1–5. doi: 10.3389/fcimb.2018.00001
![]() |
[9] |
Balogh B, Jones JB, Iriarte FB (2010) Phage therapy for plant disease control. Curr Pharm Biotechno 11: 48–57. doi: 10.2174/138920110790725302
![]() |
[10] | Civerolo EL, Kiel HL (1969) Inhibition of bacterial spot of peach foliage by Xanthomonas pruni bacteriophage. Phytopathology 59: 1966–1967. |
[11] |
Eman OH, El-Meneisy Afaf ZA (2014) Biocontrol of halo blight of bean caused by pseudomonas phaseolicola. Int J Virol 10: 235–242. doi: 10.3923/ijv.2014.235.242
![]() |
[12] |
Fujiwara A, Fujisawa M, Hamasaki R, et al. (2011) Biocontrol of ralstonia solanacearum by treatment with lytic bacteriophages. Appl Environ Microbiol 77: 4155–4162. doi: 10.1128/AEM.02847-10
![]() |
[13] | Born Y, Bosshard L, Duffy B, et al. (2015) Protection of Erwinia amylovora bacteriophage Y2 from UV-induced damage by natural compounds. Bacteriophage 5: 1–5. |
[14] | Zaccardelli M, Saccardi A, Gambin E (1992) Xanthomonas campestris pv. pruni bacteriophages on peach trees and their potential use for biological control. Plant Pathogenic Bacteria 8th International Conference 875–878. |
[15] |
Balogh B, Canteros BI, Stall RE (2008) Control of citrus canker and citrus bacterial spot with bacteriophages. Plant Dis 92: 1048–1052. doi: 10.1094/PDIS-92-7-1048
![]() |
[16] |
Balogh B, Jones JB, Iriarte FB (2010) Phage therapy for plant disease control. Curr Pharm Biotechno 11: 48–57. doi: 10.2174/138920110790725302
![]() |
[17] |
Leverentz B, Conway WS, Alavidze Z (2001) Examination of bacteriophage as a biocontrol method for Salmonella on fresh-cut fruit: a model study. J Food Protect 64: 1116–1121. doi: 10.4315/0362-028X-64.8.1116
![]() |
[18] |
Szczepankowska A (2012) Role of CRISPR/cas system in the development of bacteriophage resistance. Adv Virus Res 82: 289–338. doi: 10.1016/B978-0-12-394621-8.00011-X
![]() |
[19] |
Koskella B, Brockhurs MA (2014) Bacteria–phage coevolution as a driver of ecological and evolutionary processes in microbial communities. FEMS Microbiol Rev 38: 916–931. doi: 10.1111/1574-6976.12072
![]() |
[20] |
Carrillo LC, Atterbury JR, El-Shibiny A (2005) Bacteriophage therapy to reduce Campylobacter jejuni colonization of broiler chickens. Appl Environ Microb 71: 6554–6563. doi: 10.1128/AEM.71.11.6554-6563.2005
![]() |
[21] |
Wagenaar AJ, Van Bergen M, Mueller M (2005) Phage therapy reduces Campylobacter jejuni colonization in broilers. Vet Microbiol 109: 275–283. doi: 10.1016/j.vetmic.2005.06.002
![]() |
[22] |
Arthur MT, Kalchayanand N, Agga EG, et al. (2017) Evaluation of bacteriophage application to cattle in lairage at beef processing plants to reduce Escherichia coli O157:H7. Prevalence on hides and carcasses. Foodborne Pathog Dis 14: 17–22. doi: 10.1089/fpd.2016.2189
![]() |
[23] |
Wall KS, Zhang J, Rostagno HM (2010) Phage therapy to reduce preprocessing Salmonella infections in market-weight swine. Appl Environ Microb 76: 48–53. doi: 10.1128/AEM.00785-09
![]() |
[24] |
Bach JS, Johnson PR, Stanford K (2009) Bacteriophages reduce Escherichia coli O157:H7 levels in experimentally inoculated sheep. Can J Animal Sci 89: 285–293. doi: 10.4141/CJAS08083
![]() |
[25] |
Huanga K, Nitin N (2019) Edible bacteriophage based antimicrobial coating on fish feed for enhanced treatment of bacterial infections in aquaculture industry. Aquaculture 502: 18–25 doi: 10.1016/j.aquaculture.2018.12.026
![]() |
[26] |
Rivas L, Coffey B, McAuliffe O (2010) In vivo and ex vivo evaluations of bacteriophages e11/2 and e4/1c for use in the control of Escherichia coli O157:H7. App Environ Microb 76: 7210–7216. doi: 10.1128/AEM.01530-10
![]() |
[27] |
Hussain MA, Liu H, Wang Q (2017) Use of encapsulated bacteriophages to enhance farm to fork food safety. Crit Rev Food Sci 57: 2801–2810. doi: 10.1080/10408398.2015.1069729
![]() |
[28] | Murthy K, Engelhardt R (2012) Encapsulated bacteriophage formulation. United States Patent 2012/0258175 A1. 2012-10-11. |
[29] |
Stanford K, Mcallister AT, Niu DY (2010) Oral delivery systems for encapsulated bacteriophages targeted at Escherichia coli O157:H7 in Feedlot Cattle. J Food Protect 73: 1304–1312. doi: 10.4315/0362-028X-73.7.1304
![]() |
[30] |
Saez AC, Zhang J, Rostagno MH, et al. (2011) Direct feeding of microencapsulated bacteriophages to reduce Salmonella colonization in pigs. Foodborne Pathog Dis 8: 1241–1248. doi: 10.1089/fpd.2011.0868
![]() |
[31] |
Ma Y, Pacan CJ, Wang Q (2008) Microencapsulation of bacteriophage felix O1 into chitosan- alginate microspheres for oral delivery. Appl Environ Microb 74: 4799–4805. doi: 10.1128/AEM.00246-08
![]() |
[32] | EFSA (European Food Safety Authority), ECDC (European Centre for Disease Prevention and Control) (2017) The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2016. EFSA J 15: 5077. |
[33] | Word Health Organzation (2019) Food safety. Available from: https://www.who.int/news-room/fact-sheets/detail/food-safety. |
[34] | Moye ZD, Woolstone J, Sulakvelidze A (2018) Bacteriophage Applications for Food Production and Processing. Viruses 10: 1–22. |
[35] |
Endersen L, O'Mahony J, Hill C, et al. (2014) Phage Therapy in the Food Industry. Annu. Rev Food Sci Technol 5: 327–349. doi: 10.1146/annurev-food-030713-092415
![]() |
[36] |
de Melo AG, Levesque S, Moineau S (2018) Phages as friends and enemies in food processing. Curr Opin Biotechnol 49: 185–190. doi: 10.1016/j.copbio.2017.09.004
![]() |
[37] |
Atterbury RJ, Connerton PL, Dodd CE, et al. (2003) Application of host-specific bacteriophages to the surface of chicken skin leads to a reduction in recovery of Campylobacter jejuni. Appl Environ Microb 69: 6302–6306. doi: 10.1128/AEM.69.10.6302-6306.2003
![]() |
[38] |
Goode D, Allen VM, Barrow PA (2003) Reduction of experimental Salmonella and Campylobacter contamination of chicken skin by application of lytic bacteriophages. Appl Environ Microb 69: 5032–5036. doi: 10.1128/AEM.69.8.5032-5036.2003
![]() |
[39] |
Bigwood T, Hudson JA, Billington C (2009) Influence of host and bacteriophage concentrations on the inactivation of food-borne pathogenic bacteria by two phages. FEMS Microbiol Lett 291: 59–64. doi: 10.1111/j.1574-6968.2008.01435.x
![]() |
[40] | Orquera S, Golz G, Hertwig S, et al. (2012) Control of Campylobacter spp. and Yersinia enterocolitica by virulent bacteriophages. J Mol Genet Med 6: 273–278. |
[41] |
O'Flynn G, Ross RP, Fitzgerald GF, et al. (2004) Evaluation of a cocktail of three bacteriophages for biocontrol of Escherichia coli O157:H7. Appl Environ Microb 70: 3417–3424. doi: 10.1128/AEM.70.6.3417-3424.2004
![]() |
[42] |
Abuladze T, Li M, Menetrez MY, et al. (2008) Bacteriophages reduce experimental contamination of hard surfaces, tomato, spinach, broccoli, and ground beef by Escherichia coli O157:H7. Appl Environ Microb 74: 6230–6238. doi: 10.1128/AEM.01465-08
![]() |
[43] |
Sharma M, Patel JR, Conway WS, et al. (2009) Effectiveness of bacteriophages in reducing Escherichia coli O157:H7 on fresh-cut cantaloupe and lettuce. J Food Prot 72: 1481–1485. doi: 10.4315/0362-028X-72.7.1481
![]() |
[44] |
Carter CD, Parks A, Abuladze T, et al. (2012) Bacteriophage cocktail significantly reduced Escherichia coli O157H:7contamination of lettuce and beef, but does not protect against recontamination. Bacteriophage 2: 178–185. doi: 10.4161/bact.22825
![]() |
[45] | Boyacioglu O, Sharma M, Sulakvelidze A, et al. (2013) Biocontrol of Escherichia coli O157: H7 on fresh-cut leafy greens. Bacteriophage 3: 1–6. |
[46] | Viazis S, Akhtar M, Feirtag J, et al. (2011) Reduction of Escherichia coli O157:H7 viability on leafy green vegetables by treatment with a bacteriophage mixture and trans-cinnamaldehyde. Food Microbiol 28: 149–157. |
[47] |
Patel J, Sharma M, Millner P, et al. (2011) Inactivation of Escherichia coli O157:H7 attached to spinach harvester blade using bacteriophage. Foodborne Pathog Dis 8: 541–546. doi: 10.1089/fpd.2010.0734
![]() |
[48] |
Carlton RM, Noordman WH, Biswas B, et al. (2005) Bacteriophage P100 for control of Listeria monocytogenes in foods: genome sequence, bioinformatic analyses, oral toxicity study, and application. Regul Toxicol Pharm 43: 301–312. doi: 10.1016/j.yrtph.2005.08.005
![]() |
[49] |
Holck A, Berg J (2009) Inhibition of Listeria monocytogenes in cooked ham by virulent bacteriophages and protective cultures. Appl Environ Microbiol 75: 6944–6946 . doi: 10.1128/AEM.00926-09
![]() |
[50] |
Soni KA, Nannapaneni R., Hagens S (2010) Reduction of Listeria monocytogenes on the surface of fresh channel catfish fillets by bacteriophage listex p100. Foodborne Pathog Dis 7: 427–434 . doi: 10.1089/fpd.2009.0432
![]() |
[51] |
Soni KA, Desai M, Oladunjoye A, et al. (2012) Reduction of Listeria monocytogenes in queso fresco cheese by a combination of listericidal and listeriostatic GRAS antimicrobials. Int J Food Microbiol 155: 82–88. doi: 10.1016/j.ijfoodmicro.2012.01.010
![]() |
[52] |
Chibeu A, Agius L, Gao A, et al. (2013) Efficacy of bacteriophage LISTEXTM P100 combined with chemical antimicrobials in reducing Listeria monocytogenes in cooked turkey and roast beef. Int J Food Microbiol 167: 208–214. doi: 10.1016/j.ijfoodmicro.2013.08.018
![]() |
[53] |
Figueiredo ACL, Almeida RCC (2017) Antibacterial efficacy of nisin, bacteriophage P100 and sodium lactate against Listeria monocytogenes in ready-to-eat sliced pork ham. Braz J Microbiol 48: 724–729. doi: 10.1016/j.bjm.2017.02.010
![]() |
[54] |
Guenther S, Loessner MJ (2011) Bacteriophage biocontrol of Listeria monocytogenes on soft ripened white mold and red-smear cheeses. Bacteriophage 1: 94–100. doi: 10.4161/bact.1.2.15662
![]() |
[55] |
Bigot B, Lee WJ, McIntyre L, et al. (2011) Control of Listeria monocytogenes growth in a ready-to-eat poultry product using a bacteriophage. Food Microbiol 28: 1448–1452. doi: 10.1016/j.fm.2011.07.001
![]() |
[56] |
Modi R, Hirvi Y, Hill A, et al. (2001) Effect of phage on survival of Salmonella Enteritidis during manufacture and storage of cheddar cheese made from raw and pasteurized milk. J Food Protect 64: 927–933. doi: 10.4315/0362-028X-64.7.927
![]() |
[57] |
Leverentz B, Conway WS, Camp MJ, et al. (2003) Biocontrol of Listeria monocytogenes on fresh-cut produce by treatment with lytic bacteriophages and a bacteriocin. Appl Environ Microbiol 69: 4519–4526. doi: 10.1128/AEM.69.8.4519-4526.2003
![]() |
[58] |
Whichard JM, Sriranganathan N, Pierson FW, et al. (2003) Suppression of Salmonella growth by wild-type and large-plaque variants of bacteriophage Felix O1 in liquid culture and on chicken frankfurters. J Food Prot 66: 220–225. doi: 10.4315/0362-028X-66.2.220
![]() |
[59] |
Guenther S, Herzig O, Fieseler L, et al. (2012) Biocontrol of Salmonella Typhimurium in RTE foods with the virulent bacteriophage FO1-E2. Int J Food Microbiol 154: 66–72. doi: 10.1016/j.ijfoodmicro.2011.12.023
![]() |
[60] |
Spricigo DA, Bardina C, Cortés P, et al. (2013) Use of a bacteriophage cocktail to control Salmonella in food and the food industry. Int J Food Microbiol 165: 169–174. doi: 10.1016/j.ijfoodmicro.2013.05.009
![]() |
[61] | Farber JM, Peterkin PI (1991) Listeria monocytogenes, a foodborne pathogen. Microbiol Rev 55: 476–511. |
[62] |
Leistner L, Gorris LGM (1995) Food preservation by hurdle technology. Trends Food Sci Technol 6: 41–46 . doi: 10.1016/S0924-2244(00)88941-4
![]() |
[63] | Phages as probiotics. Available from: http://intralytix.com/index.php?page=pro. |
[64] | Proteon Pharmaceuticals. Available from: https://www.proteonpharma.com. |
[65] |
Schmelcher M, Loessner JM (2016) Bacteriophage endolysins: applications for food safety. Curr Opin Biotechnol 37: 76–87. doi: 10.1016/j.copbio.2015.10.005
![]() |
[66] | Gutiérrez D, Rodríguez-Rubio L, Martíne B, et al. (2016) Bacteriophages as weapons against bacterial biofilms in the food industry. Front Microbiol 7: 1–16. |
[67] | Da Silva Felício MT, Hald T, Liebana E, et al. (2015) Risk ranking of pathogens in ready-to-eat unprocessed foods of non-animal origin (FoNAO) in the EU: initial evaluation using outbreak data (2007–2011). Int J Food Microbiol 16: 9–19. |
[68] |
Beuchat LR (2002) Ecological factors influencing survival and growth of human pathogens on raw fruits and vegetables. Microbes Infect 4: 413–423. doi: 10.1016/S1286-4579(02)01555-1
![]() |
[69] |
Siringan P, Connerton PL, Payne RJ (2011) Bacteriophage-mediated dispersal of Campylobacter jejuni biofilms. Appl Environ Microb 77: 3320–3326. doi: 10.1128/AEM.02704-10
![]() |
[70] |
Soni KA, Nannapaneni R, Hagens S (2010) Reduction of Listeria monocytogenes on the surface of fresh channel catfish fillets by bacteriophage listex p100. Foodborne Pathog Dis 7: 427–434. doi: 10.1089/fpd.2009.0432
![]() |
[71] |
Sutherland IW, Hughes KA, Skillman LC, et al. (2004) The interaction of phage and biofilms. FEMS Microbiol Lett 232: 1–6. doi: 10.1016/S0378-1097(04)00041-2
![]() |
[72] |
Maszewska A (2015) Phage associated polysaccharide depolymerases–characteristics and application. Postep Hig Med Dos 69: 690–702. doi: 10.5604/17322693.1157422
![]() |
[73] |
Drulis-Kawa Z, Majkowska-Skrobek G, Maciejewska B (2015) Bacteriophages and phage- derived proteins--application approaches. Curr Med Chem 22: 1757–1773. doi: 10.2174/0929867322666150209152851
![]() |
[74] | Lehman SM (2007) Development of a bacteriophage-based biopesticide for fire blight. PhD Thesis. Department of Biological Sciences, Brock University, Canada. |
[75] |
Hughes KA, Sutherland IW, Jones MV (1998) Biofilm susceptibility to bacteriophage attack: the role of phage-borne polysaccharide depolymerase. Microbiology 144: 3039–3047. doi: 10.1099/00221287-144-11-3039
![]() |
[76] |
Chai Z, Wang J, Tao S, et al. (2014) Application of bacteriophage-borne enzyme combined with chlorine dioxide on controlling bacterial biofilm. LWT Food Sci Technol 59: 1159–1165. doi: 10.1016/j.lwt.2014.06.033
![]() |
[77] | Love JM, Bhandari D, Dobson CR, et al. (2018) Potential for bacteriophage endolysins to supplement or replace antibiotics in food production and clinical care. Antibiotics 7: 1–25. |
[78] | Gutierrez D, Ruas-Madiedo P, Martınez B (2014) Effective removal of Staphylococcal biofilms by the endolysin LysH5. PloS One 9: 1–8. |
[79] | Oliveira H, Thiagarajan V, Walmagh M (2014) A thermostable Salmonella phage endolysin Lys68, with broad bactericidal properties against gram-negative pathogens in presence of weak acids. PloS One 9: 1–11. |
[80] |
Obeso MJ, Martínez B, Rodríguez A, et al. (2008) Lytic activity of the recombinant staphylococcal bacteriophage ΦH5 endolysin active against Staphylococcus aureus in milk. Int J Food Microbiol 128: 212–218. doi: 10.1016/j.ijfoodmicro.2008.08.010
![]() |
[81] | Olsen NMC, Thiran E, Hasler T, et al. (2018) Synergistic removal of static and dynamic Staphylococcus aureus biofilms by combined treatment with a bacteriophage endolysin and a polysaccharide depolymerase. Viruses 10: 2–17. |
[82] | Yoyeon Ch, Son B, Ryu S (2019) Effective removal of staphylococcal biofilms on various food contact surfaces by Staphylococcus aureus phage endolysin LysCSA13. Food Microbiol 84: 1–7. |
[83] |
Zhang H, Bao H, Billington C (2012) Isolation and lytic activity of the Listeria bacteriophage endolysin LysZ5 against Listeria monocytogenes in soya milk. Food Microbiol 31: 133–136. doi: 10.1016/j.fm.2012.01.005
![]() |
[84] |
Van Nassau TJ, Lenz CA, Scherzinger AS (2017) Combination of endolysins and high pressure to inactivate Listeria monocytogenes. Food Microbiol 68: 81–88. doi: 10.1016/j.fm.2017.06.005
![]() |
[85] |
Gaeng S, Scherer S, Neve H (2000) Gene cloning and expression and secretion of Listeria monocytogenes bacteriophage-lytic enzymes in Lactococcus lactis. Appl Environ Microb 66: 2951–2958. doi: 10.1128/AEM.66.7.2951-2958.2000
![]() |
[86] | Garneau EJ, Moineau S (2001) Bacteriophages of lactic acid bacteria and their impact on milk fermentations. Microb Cell Fact 10: 1–10. |
[87] | Atamer Z, Samtlebe M, Neve H, et al. (2013) Review: elimination of bacteriophages in whey and whey products. Front Microbiol 4: 1–9. |
[88] |
Mercanti D, Carminati D, Reinheimer JA, et al. (2011) Widely distributed lysogeny in probiotic lactobacilli represents a potentially high risk for the fermentative dairy industry. Int J Food Microbiol 144: 503–510. doi: 10.1016/j.ijfoodmicro.2010.11.009
![]() |
[89] |
Tahir A, Asif M, Abbas Z (2017) Three bacteriophages SA, SA2 and SNAF can control growth of milk isolated Staphylococcal species. Pak J Zool 49: 425–759. doi: 10.17582/journal.pjz/2017.49.2.425.434
![]() |
[90] |
Singh A, Poshtiban S, Evoy S (2013) Recent advances in bacteriophage based biosensors for food-borne pathogen detection. Sensors 13: 1763–1786. doi: 10.3390/s130201763
![]() |
1. | Yin Li, Ian Robertson, The epidemiology of swine influenza, 2021, 1, 2731-0442, 10.1186/s44149-021-00024-6 | |
2. | Fangyuan Chen, Zoonotic modeling for emerging avian influenza with antigenic variation and (M+1)–patch spatial human movements, 2023, 170, 09600779, 113433, 10.1016/j.chaos.2023.113433 |
Strategies | no strategy | Strategy 1 | Strategy 2 | Strategy 3 |
Reproductive number in wildlife | | |||
Reproductive number in domestic animals | | | ||
Reproductive number in humans | | | ||
Parameter | Definitions | Values | Sources |
birth or immigration rate of wild aquatic birds | 0.137 birds/day | Est. | |
| natural mortality rate of wild aquatic birds | 0.000137/day | [33] |
| recovery rate of wild aquatic birds | 0.25/day | Est. |
| disease-induced mortality rate of wild aquatic birds | 0.0025/day | Est. |
| birth or immigration rate of domestic birds | 48.72 birds/day | [33] |
| natural mortality rate of domestic birds | 0.0058/day | [33] |
| recovery rate of domestic birds | 0.25/day | [26] |
| disease-induced mortality rate of domestic birds | 0.0025/day | Est. |
| birth or immigration rate of humans | 0.07people/day | [23] |
| natural mortality rate of humans | 0.000035/day | [23] |
| recovery rate of humans | 0.33/day | [26, 31] |
| remove rate from isolation compartment to susceptible compartment. | 0.5/day | Est. |
| remove rate from isolation compartment to recovery individual compartment. | 0.5/day | Est. |
| disease-induced mortality rate of humans | 0.0033/day | Est. |
| basic reproductive number of wild aquatic birds | 2 | Est. |
| basic reproductive number of domestic birds | 2 | Est. |
| basic reproductive number of humans | 1.2 | [26] |
| per capita incidence rate from wild aquatic birds to domestic birds | Est. | |
| per capita incidence rate from wild aquatic birds to humans | Est. | |
| per capita incidence rate from domestic birds to humans | Est. |
Strategies | no strategy | Strategy 1 | Strategy 2 | Strategy 3 |
Reproductive number in wildlife | | |||
Reproductive number in domestic animals | | | ||
Reproductive number in humans | | | ||
Parameter | Definitions | Values | Sources |
birth or immigration rate of wild aquatic birds | 0.137 birds/day | Est. | |
| natural mortality rate of wild aquatic birds | 0.000137/day | [33] |
| recovery rate of wild aquatic birds | 0.25/day | Est. |
| disease-induced mortality rate of wild aquatic birds | 0.0025/day | Est. |
| birth or immigration rate of domestic birds | 48.72 birds/day | [33] |
| natural mortality rate of domestic birds | 0.0058/day | [33] |
| recovery rate of domestic birds | 0.25/day | [26] |
| disease-induced mortality rate of domestic birds | 0.0025/day | Est. |
| birth or immigration rate of humans | 0.07people/day | [23] |
| natural mortality rate of humans | 0.000035/day | [23] |
| recovery rate of humans | 0.33/day | [26, 31] |
| remove rate from isolation compartment to susceptible compartment. | 0.5/day | Est. |
| remove rate from isolation compartment to recovery individual compartment. | 0.5/day | Est. |
| disease-induced mortality rate of humans | 0.0033/day | Est. |
| basic reproductive number of wild aquatic birds | 2 | Est. |
| basic reproductive number of domestic birds | 2 | Est. |
| basic reproductive number of humans | 1.2 | [26] |
| per capita incidence rate from wild aquatic birds to domestic birds | Est. | |
| per capita incidence rate from wild aquatic birds to humans | Est. | |
| per capita incidence rate from domestic birds to humans | Est. |