Research article Special Issues

Meta-analysis of voice disorders databases and applied machine learning techniques

  • Received: 20 August 2020 Accepted: 25 October 2020 Published: 11 November 2020
  • Background and ObjectiveVoice disorders are pathological conditions that directly affect voice production. Computer based diagnosis may play a major role in the early detection and in tracking and even development of efficient pathological speech diagnosis, based on a computerized acoustic evaluation. The health of the Voice is assessed by several acoustic parameters. The exactness of these parameters is often linked to algorithms used to estimate them for speech noise identification. That is why main effort of the scientists is to study acoustic parameters and to apply classification methods that achieve a high precision in discrimination. The primary aim of this paper is for a meta-analysis on voice disorder databases i.e. SVD, MEEI and AVPD and machine learning techniques applied on it.
    Materials and MethodsThis field of study was systematically reviewed in compliance with PRISMA guidelines. A search was performed with a set of formulated keywords on three databases i.e. Science Direct, PubMed, and IEEE Xplore. A proper screening and analysis of articles were performed after which several articles were also excluded.
    ResultsForty-five studies that fulfills the eligibility criteria were included in this meta-analysis. After applying eligibility criteria on the peer reviewed and research article and studies that were published in authentic journals and conferences proceedings till June 2020 were chosen for further full-text screening. In general, only those articles that used voice recordings from SVD, MEEI and AVPD databases as a dataset is included in this meta-analysis.
    ConclusionWe discussed the strengths and weaknesses of SVD, MEEI and AVPD. After detailed analysis of the studies including the techniques used and outcome measurements, it was also concluded that Support Vector Machine (SVM) is the most common used algorithm for the detection of voice disorders. Other than was also noticed that researchers focus on supervised techniques for the clinical diagnosis of voice disorder rather than using unsupervised techniques. It was also concluded that more work needs to be on voice pathology detection using AVPD database.

    Citation: Sidra Abid Syed, Munaf Rashid, Samreen Hussain. Meta-analysis of voice disorders databases and applied machine learning techniques[J]. Mathematical Biosciences and Engineering, 2020, 17(6): 7958-7979. doi: 10.3934/mbe.2020404

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  • Background and ObjectiveVoice disorders are pathological conditions that directly affect voice production. Computer based diagnosis may play a major role in the early detection and in tracking and even development of efficient pathological speech diagnosis, based on a computerized acoustic evaluation. The health of the Voice is assessed by several acoustic parameters. The exactness of these parameters is often linked to algorithms used to estimate them for speech noise identification. That is why main effort of the scientists is to study acoustic parameters and to apply classification methods that achieve a high precision in discrimination. The primary aim of this paper is for a meta-analysis on voice disorder databases i.e. SVD, MEEI and AVPD and machine learning techniques applied on it.
    Materials and MethodsThis field of study was systematically reviewed in compliance with PRISMA guidelines. A search was performed with a set of formulated keywords on three databases i.e. Science Direct, PubMed, and IEEE Xplore. A proper screening and analysis of articles were performed after which several articles were also excluded.
    ResultsForty-five studies that fulfills the eligibility criteria were included in this meta-analysis. After applying eligibility criteria on the peer reviewed and research article and studies that were published in authentic journals and conferences proceedings till June 2020 were chosen for further full-text screening. In general, only those articles that used voice recordings from SVD, MEEI and AVPD databases as a dataset is included in this meta-analysis.
    ConclusionWe discussed the strengths and weaknesses of SVD, MEEI and AVPD. After detailed analysis of the studies including the techniques used and outcome measurements, it was also concluded that Support Vector Machine (SVM) is the most common used algorithm for the detection of voice disorders. Other than was also noticed that researchers focus on supervised techniques for the clinical diagnosis of voice disorder rather than using unsupervised techniques. It was also concluded that more work needs to be on voice pathology detection using AVPD database.


    In this paper, we consider the infectious disease transmission models. Denoted by S(t), I(t), and R(t), the numbers of susceptible, infective, and recovered or removed individuals at time t, respectively. The classical susceptible-infective-recovered-susceptible (SIRS) model has the form

    {˙S=bdSg(I)S+δR,˙I=g(I)S(d+μ)I,˙R=μI(d+δ)R, (1.1)

    where b>0 and d>0 represent the recruitment rate and the natural death rate of population respectively, μ>0 expresses the natural recovery rate of the infective individuals, and δ>0 denotes the rate at which recovered individuals lose immunity and return to the susceptible class. g(I)S is the incidence rate, and g(I) measures the infection force of a disease.

    In most epidemic models, the incidence rate adopts the form of mass action with bilinear interactions, namely g(I)S=kIS, where the constant k is the probability of transmission per contact and g(I)=kI is unbounded when I0. The model (1.1) with g(I)=kI usually has at most one endemic equilibrium and has no period orbit. The disease will die out if the basic reproduction number is less than one and will persist otherwise (see Hethcote [4]). Recently, different types of nonlinear incidence rates have been applied in the study of epidemic diseases. For example, Liu et al. [5] proposed a general nonlinear incidence rate defined by

    g(I)S=kIpS1+αIq, (1.2)

    where kIp measures the infection force of the disease, 1/(1+αIq) describes the inhibition effect from the behavioral change of the susceptible individuals when the number of infectious individuals increases (see Capasso and Serio [6]). α0 measures the psychological or inhibitory effect, p,k,q are real constants with p>0,k>0,q0. Note that g(I)S=kSI in (1.2) if α=0 and p=1.

    For general p and q, Hu et al. in [1] studied the SIRS model (1.1) with (1.2). For simplicity, they considered the reduced system

    {˙I=kIp1+αIq(bdIR)(d+μ)I,˙R=μI(d+δ)R. (1.3)

    By calculation, E(I,R) is a positive equilibrium of system (1.3) if and only if I>0 satisfies

    1KIpIp1+ασIq+1σ=0, (1.4)

    where

    K=b(d+δ)d(d+δ+μ),σ=kbd(μ+d).

    It was shown in [1] that the model (1.3) can have very rich and complex dynamical behaviors. More precisely, system (1.3) can have multiple endemic equilibria and different types of bifurcations, including Hopf and Bogdanov-Takens bifurcations. Note that the expressions of the positive equilibria cannot be explicitly expressed for general p and q. They only gave the calculation formula of the first Lyapunov constant of the unique positive equilibrium (if it is linearly a center), which can be found in many books. In addition, the first Lyapunov constant is a very complex function of I. In other words, the exact codimension of Hopf bifurcation remains unknown. Furthermore, the conditions for determining the codimension of Bogdanov-Takens bifurcation are complex functions of I. Thus, they can not determine the maximum codimension of Bogdanov-Takens bifurcation.

    In the paper [3], the nonlinear function g(I) is classified into the three types: unbounded incidence function with p>q, saturated incidence function with p=q, and nonmonotone incidence function p<q. The results on the dynamics of system (1.1) can be found in [2,3,6,7,8,9,10,11] and reference therein.

    For saturated incidence function with p=q, as early as 1991, Hethcote and van den Driessche [7] showed that Hopf bifurcation can occur in system (1.1) with saturated incidence rate (1.2) (when q=p). For similar reasons as in [1], they did not determine the exact codimension of Hopf bifurcation. For the special case of q=p=1, Gomes et al. [12] showed the existence of backward bifurcations, oscillations, and Bogdanov-Takens points in SIR and SIS models. For the special case of q=p=2, system (1.1) with (1.2) was analysed by Ruan and Wang in [2]. It was shown that it can undergo Bogdanov-Takens bifurcation of codimension two and Hopf bifurcation of codimension one. Later, Tang et al. in [3] calculated the higher order Lyapunov constants of the weak focus and proved that the maximal order of the weak focus is two. They also obtained the coexistence of a limit cycle and a homoclinic loop. Recently, Lu et al. [13] considered a more general model and proved that the codimension of Bogdanov-Takens bifurcation is at most two. These results indicate that the case q=p>1 may be very complicated and deserves further investigation.

    Although a lot of work on SIRS models have been obtained, there are still a lot of open problem for it. In order to understand the dynamical behavior of system (1.1) and also motivated by the works in [1], [2], [3], [7] and [13], we focused on the model (1.1) with a general saturated incidence rate kIp/(1+αIp), i.e., the case q=p in (1.2). Based on the results of [1], the model with p1 has the simple dynamics. Hence, we study the SIRS epidemic model (1.1) with q=p>1 in this paper, i.e., the system defined as

    {˙S=bdSkSIp1+αIp+δR,˙I=kSIp1+αIp(d+μ)I,˙R=μI(d+δ)R, (1.5)

    where S(0)0, I(0)0, R(0)0 and k,α,b,d,μ,δ>0,p>1.

    For general p>1, to study the model (1.5), one of the difficulties is that the coordinate of positive equilibria cannot be explicitly expressed for p. The second difficulty is that the model of this type is often not a polynomial differential system or can not transformed into a polynomial differential system. Finally, another difficulty is the lack of the methods to determine the order of a weak focus. In this paper, we will provide some available methods and techniques to overcome these difficulties, and perform qualitative and bifurcation analysis of system (1.5). We find that system (1.5) have the complicated dynamical behaviors and bifurcation phenomena like the special case of p=2. It is shown that the codimension of Bogdanov-Takens bifurcation is at most two, which coincides with the corresponding results for p=2 in [13]. In addition, This also improves the results for p=2 in [2] and [3]. Moreover, our results on Hopf bifurcation coincides with the ones for p=2 in [3] and [13], and also can be seen as a complement of the results for p=2 obtained in [1] and [2]. Furthermore, there exist some critical values α=α0 (i.e., b=b0 or δ=δ0) and δ=δ2 such that: (i) if α>α0 (i.e., b<b0, or δ<δ0), the disease will die out; (ii) if α=α0 (i.e., b=b0, or δ=δ0) and δδ2, the disease will die out for almost all positive initial populations; (iii) if α=α0 (i.e., b=b0, or δ=δ0) and δ>δ2, the disease will persist in the form of a positive coexistent steady state for some positive initial populations; and (iv) if α<α0, the disease will persist in the form of multiple positive periodic coexistent oscillations and coexistent steady states for some positive initial populations.

    Though the SIRS epidemic models with nonlinear incidence rates have been extensively studied, to the best of our knowledge, this is the first time that the exact codimension of Hopf bifurcation and Bogdanov-Takens bifurcation have been determined in epidemic model for general parameter. It is worth mentioning that the difficulties of study of system (1.5), as mentioned above, are not only a common problem of other infectious disease models, but also a common problem of chemical molecular reaction models, physical systems, etc. The methods and techniques developed in this paper can be applied to study most of the complex dynamical systems.

    The rest of this paper is organized as follows. In Section 2, we give some preliminary results. Section 3 is devoted to study saddle-node bifurcation, Bogdanov-Takens bifurcation and Hopf bifurcation, and illustrate these results by simulation.

    In this section, we are going to provide some preliminary results, which are the basis for proving the main results.

    To simplify the system (1.5), we first give the following lemma.

    Lemma 2.1. System (1.5) has the invariant manifold defined by S(t)+I(t)+R(t)=b/d, which is attracting in the first quadrant.

    Proof. Let N(t)=S(t)+I(t)+R(t). It follows from (1.5) that

    ˙N=bdN.

    Obviously, N(t)=b/d is a stable equilibrium of the above equation, which implies the conclusion.

    It follows from Lemma 2.1 that the plane S(t)+I(t)+R(t)=b/d is a limit set of system (1.5) and all important dynamical behaviors of (1.5) are on this plane. Thus, in the rest of this paper we consider the following limit system in the first quadrant

    {˙I=kIp1+αIp(bdIR)(d+μ)I,˙R=μI(d+δ)R. (2.1)

    Denote

    D={(I,R)I0,R0,I+Rbd}.

    Obviously D is a positive invariant set of system (2.1).

    Take the scalings

    I=(d+δk)1px,R=(d+δk)1py,t=1d+δτ,

    to get

    {˙x=xp1+βxp(Axy)mx,˙y=nxy, (2.2)

    where we rewrite τ into t, and

    β=αd+δk,A=bd(kd+δ)1p,m=d+μd+δ,n=μd+δ, (2.3)

    which give

    β>0,A>0,p>1,m>n>0. (2.4)

    The positively invariant set D becomes

    D={(x,y)x0,y0,x+yA}.

    The dynamics generated by system (2.2) and (2.1) in D are topological equivalent. Hence we only need to study system (2.2) in the region D with parameters satisfying the conditions (2.4).

    Remark 2.2. In the rest of this paper, we study system (2.2) in D with the assumption that the inequlities in (2.4) hold.

    E0(0,0) is always an equilibrium of system (2.2). The Jacobian matrix of system (2.2) at E0 is

    J(E0)=(m0n1),

    which has two negative eigenvalues m and 1. Thus, E0(0,0) is a stable hyperbolic node.

    Denote by E(ˉx,ˉy) a positive equilibrium of system (2.2). Then

    xp1+βxp(Axnx)mx=0,ˉy=nˉx

    in the interval (0,A/(n+1)), or

    h(ˉx)=0,ˉxAn+1, (2.5)

    where

    h(x)=(mβ+n+1)xpAxp1+m. (2.6)

    A direct computation shows that

    h(x)=p(mβ+n+1)(xx)xp2, (2.7)

    where

    0<x=A(p1)p(mβ+n+1)An+1. (2.8)

    It is obvious that h(x) has a unique positive root at x=x. Therefore, h(x) has no positive zero if h(x)>0, or has a unique positive zero at x=x if h(x)=0, or has two positive zeros at x=x1, x2 with 0<x1<x<x2 if h(x)<0. Notice that h(A/(n+1))>0, which means x2<A/(n+1). By calculation, h(x)<0 is equivalent to A>A, i.e., β<β, or n<n, where

    A=pm1p(mβ+n+1p1)11p,β=1m[p1pApp1(mp)1p1n1],n=p1pApp1(mp)1p1mβ1. (2.9)

    Theorem 2.3. Let x, A, β and n are given by (2.8) and (2.9). System (2.2) always has a disease-free equilibrium E0(0,0). Moreover, for system (2.2),

    (I) if A<A (i.e., β>β, or n>n), then there is no positive equilibrium;

    (II) if A=A (i.e., β=β or n=n), then there is a unique positive equilibrium at E(x,y);

    (III) if A>A (i.e., β<β, or n<n), then there are two positive equilibria at E1(x1,y1) and E2(x2,y2), where 0<x1<x<x2<2x.

    Notice that E0(0,0) is a stable node. According to the index theory, since D is positively invariant, system (2.2) has no limit cycle in D if it has no equilibrium. By Theorem 2.3(I), we have the following result.

    Theorem 2.4. The disease-free equilibrium E0(0,0) of system (2.2) is globally asymptotical stable in D if A<A (i.e., β>β, or n>n).

    By Theorem 2.4, we get the following corollary.

    Corollary 2.5. The disease-free equilibrium (b/d,0,0) of system (1.5) is globally asymptotical stable in the interior R3+ and the disease will die out if A<A (i.e., β>β, or n>n).

    Remark 2.6. From (2.3) and Theorem 2.4, we obtain that A<A is equivalent to α>α0 or b<b0 or δ<δ0 by calculation, where

    α0=kd+μ[(p1)(bpd)pp1(kd+μ)1p1μd+δ1],b0=dpk(p1)1p1(d+μ)1p[α(d+μ)+μkd+δ+k]11p,δ0=μ[(p1)(bpd)pp1(kd+μ)1p1α(d+μ)k1]1.

    Therefore, the disease will die out if either α>α0, or b<b0, or δ<δ0.

    Remark 2.7. When p=2, it follows from Remark 2.6 that

    α0=b2k2(d+δ)4d2(d+μ)(d+μ+δ)4d2(d+μ)2(d+δ),

    which coincides with the α0 in Remark 2.1 of [13] when β=0.

    Next consider the positive equilibrium E(ˉx,ˉy) of system (2.2), whose coordinate satisfies

    ˉy=nˉx,ˉxp1(Aˉxˉy)=m(1+βˉxp).

    The Jacobian matrix of system (2.2) at E(ˉx,ˉy) is

    J(E)=(J11J12n1),

    where

    J11=[pm(1+βˉxp)ˉxp]mβpˉxp1+βˉxpm=m(p1)(mβ+1)ˉxp1+βˉxp,J12=ˉxp1+βˉxp,

    which gives

    Det(J(E))=p(mβ+n+1)(ˉxx)ˉxp11+βˉxp=ˉxh(ˉx)1+βˉxp,

    and its sign is determined by h(ˉx), where h(x) is defined in (2.7).

    The trace of J(E) is

    Tr(J(E))=11+βˉxpST(ˉx),

    where

    ST(ˉx)=(mpm1)(mβ+β+1)ˉxp. (2.10)

    To study the positive equilibria, let

    p1=1+1m,n1=mpβ+1mpm1,(pp1).

    Note that p>p1 if and only if n1>0.

    Theorem 2.8. If A=A, then system (2.2) has a unique equilibrium at E(x,y) in D.

    (I) If (i) 1<pp1, or (ii) p>p1, nn1, then E is a saddle-node.

    (II) If p>p1 and n=n1, then E is a cusp of codimension two.

    Proof. If A=A, it follows from Theorem 2.3 that system (2.2) has a unique positive equilibrium E(x,y), where x is given by (2.8) satisfying h(x)=h(x)=0, and y=nx. This implies Det(J(E))=0. It follows from h(x)=0 and (2.8) that

    xp=mAx1(mβ+n+1)=m(p1)mβ+n+1. (2.11)

    Substituting it into ST(x), we get

    ST(x)=(mpm1)nmpβ1mβ+n+1.

    If mpm10, i.e., 1<pp1, then ST(x)<0. Assume that mpm1>0, i.e., p>p1, then ST(x)<0 if and only if n<n1, ST(x)>0 if and only if n>n1 and ST(x)=0 if and only if n=n1, respectively.

    (I) Suppose either 1<pp1, or p>p1 and nn1. Then Tr(J(E))0 and Det(J(E))=0, which imply that 0 and J11(E)1=Tr(J(E))0 are eigenvalues of the matrix J(E). Taking the changes X=xx,Y=yy and ˉX=nX+J11(E)Y,ˉY=nX+Y,τ=Tr(J(E))t, system (2.3) is written as (for simplicity, still denote ˉX,ˉY,τ by x,y,t, respectively)

    {˙x=η1x2+η2xy+η3x3+η4x2y+o((x,y)3)=P2(x,y),˙y=y+η1x2+η2xy+η3x3+η4x2y+o((x,y)3)=y+Q2(x,y), (2.12)

    where η2,η3,η4 are real numbers, and it follows from (2.11) that

    η1=p2xp(mβ+n+1){β[βmp(p+1)+(n+1)(3p1)]xp+(p1)(βmp+n+1)}2n(Tr(J(E)))3A(p1)2(1+βxp)2,=p2xp(mβ+n+1)(βmp+n+1)22n(Tr(J(E)))3A(p1)(1+βxp)20.

    Solving the equation y+Q2(x,y)=0, we get that y(x)=η1x2+, which implies that P2(x,y(x))=η1x2+. By Theorem 7.1 of Chapter 2 in [14], the origin is a saddle-node of system (2.12). This proves the assertion (I).

    (II) Suppose that A=A and n=n1. Let X=xx,Y=yy. Then system (2.2) takes the form (rewrite X, Y into x,y, respectively)

    ˙x=x+a1y+a2x2+a3xy+o((x,y)2),˙y=n1xy, (2.13)

    where

    a1=1n1,a2=(2+mmp)p(n1β)1p+12n1,a3=p(n1β)1p+1n21.

    Let X=x, Y=xy/n1 to get (rewrite X, Y into x,y, respectively)

    ˙x=y+(a2+a3n1)x2a3n1xy+o((x,y)2),˙y=(a2+a3n1)x2a3n1xy+o((x,y)2). (2.14)

    Taking the change z=y+(a2+a3n1)x2a3n1xy+o((x,y)2),t=(1+a3n1x)τ, system (2.14) is reduced to the following system in the small neighborhood of (0,0)

    dxdτ=z(1+a3n1x),dzdτ=(1+a3n1x)((a2+a3n1)x2+(2a2+a3n1)xza3n1z2+o((x,y)2).

    Let Y=z(1+a3n1x) and rewrite Y as y. We have

    ˙x=y,˙y=(a2+a3n1)x2+(2a2+a3n1)xy+o((x,y)2), (2.15)

    where

    a2+a3n1=m(1p)p(n1β)1+1p2n1,2a2+a3n1=p(1+β+mβ)(n1β)1pn1.

    Since n1β=(1+β+mβ)/(mpm1)0, we have a2+a3n10 and 2a2+a3n10. By the results in [15], E(x,y) is a cusp of codimension two.

    Theorem 2.9. If A>A (i.e., β<β or n<n), system (2.2) has two positive equilibria E1(x1,y1) and E2(x2,y2), where 0<x1<x<x2<2x. Moreover, E1 is always a saddle point, and E2 is

    (I) a stable focus (or node) if ST(x2)<0; or

    (II) a weak focus (or a center) if ST(x2)=0; or

    (III) an unstable focus (or node) if ST(x2)>0, where ST is given in (2.10).

    Proof. The first half of the theorem holds by Theorem 2.3. To determine the types of E1 and E2, consider the signs of h(x1), h(x2), ST(x1) and ST(x2), where h(x), ST(x) are given in (2.7) and (2.10), respectively. Noting 0<x1<x<x2 (cf. Theorem 2.3), we have h(x1)<0<h(x2). This follows that the Jacobian determinants at E1 and E2 satisfy Det(J(E1))<0 and Det(J(E2))>0, respectively. Hence we obtain the types of E1 and E2.

    We are going to investigate various bifurcations in system (2.2) in this section.

    From Theorem 2.8, we know that the surface

    SN={(A,m,n,β)A=A,either1<pp1,orp>p1,nn1}

    is the saddle-node bifurcation surface under the assumption (2.4). On one side of this surface there is no equilibrium and on the other side there are two equilibria.

    In this subsection, we study the Bogdanov-Takens bifurcation of codimension two for system (2.2).

    Theorem 3.1. If A=A, n=n1, p>p1 and conditions (2.4) hold, then the unique positive equilibrium E(x,y) is a cusp of codimension two (i.e., Bogdanov-Takens singularity), and system (2.2) undergoes Bogdanov-Takens bifurcation of codimension two in a small neighborhood of E(x,y) when we choose A and n as bifurcation parameters. Hence, there are different parameter values such that system (2.2) has an unstable limit cycle or an unstable homoclinic loop.

    Proof. Consider the system

    ˙x=xp1+βxp(A+λ1xy)mx,˙y=(n1+λ2)xy, (3.1)

    in a small neighborhood of the equilibrium E(x,y), where λ1 and λ2 are small parameters. To convenience, in below the functions P1(x,y,λ1,λ2) and Qi(x,y,λ1,λ2),i=1,2,3,4, are C functions at least of third order with respect to (x,y), whose coefficients depend smoothly on λ1 and λ2, .

    Taking the changes X=xx, Y=yy, system (3.1) is rewritten as (we still denote X, Y by x, y, respectively)

    ˙x=b1+b2x1ny+b3x2+b4xy+P1(x,y,λ1,λ2),˙y=b5+b6xy, (3.2)

    where

    b1=λ1n1,b2=1a3λ1,b3=a2p(n1β)1+2p(2pβ+n1pn1)2n31λ1,b4=a3,
    b5=(n1β)1pλ2,b6=n1+λ2.

    Let

    X=x,Y=b1+b2x1n1y+b3x2+b4xy+P1(x,y,λ1,λ2).

    System (3.2) takes the form (we rewrite X, Y as x, y, respectively)

    ˙x=y,˙y=c1+c2x+c3y+c4x2+c5xy+c6y2+Q1(x,y,λ1,λ2), (3.3)

    with

    c1=1n1λ1(n1β)1pn1λ2+O(|λ1,λ2|3),c2=a3λ1+(a3(n1β)1p1n1)λ2+O(|λ1,λ2|2),c3=O(|λ1,λ2|2),c4=a2+a3n1+O(|λ1,λ2|),c5=2a2+a3n1+O(|λ1,λ2|),c6=a3n1+O(|λ1,λ2|).

    Next let dt=(1c6x)dτ. System (3.3) takes the form (still denote τ by t)

    ˙x=y(1c6x),˙y=(1c6x)(c1+c2x+c3y+c4x2+c5xy+c6y2+Q1(x,y,λ1,λ2). (3.4)

    Let X=x, Y=y(1c6x), and rewrite X, Y as x, y respectively. System (3.4) becomes

    ˙x=y,˙y=d1+d2x+d3y+d4x2+d5xy+Q2(x,y,λ1,λ2), (3.5)

    where

    d1=c1,d2=c22c1c6,d3=c3,d4=c42c2c6+c1c62,d5=c5c3c6.

    If λ1=λ2=0, then by direct computation and the proof of Theorem 2.8, we get

    d1=0,d2=0,d3=0,d4=a2+a3n10,d5=2a2+a3n10.

    Further, let X=x+d2/(2d4),Y=y. System (3.5) becomes (we rewrite X, Y as x, y, respectively)

    ˙x=y,˙y=e1+e2y+e3x2+e4xy+Q3(x,y,λ1,λ2), (3.6)

    where

    e1=d1d224d4,e2=d3d2d52d4,e3=d4,e4=d5.

    Finally, taking the changes

    X=e24e3x,Y=e34e23y,τ=e3e4t,

    one obtains (we rewrite X, Y as x, y, respectively)

    ˙x=y,˙y=μ1+μ2y+x2+xy+Q4(x,y,λ1,λ2), (3.7)

    where

    μ1=e1e44e33,μ2=e2e4e3.

    We can express μ1 and μ2 in terms of λ1 and λ2 as follows:

     μ1=s1λ1+s2λ2+o((λ1,λ2)), μ2=t1λ1+t2λ2+o((λ1,λ2)), (3.8)

    where

    s1=8p(n1β)1+1p(mpm1)4m3(p1)3n21,s2=8p(n1β)(mpm1)4m3(p1)3n21,t1=2p(mpm1)2(n1β)1+1pm2(p1)2n21,t2=2(mpm1)(p+pβ1)m2(p1)2n21.

    Since

    |(μ1,μ2)(λ1,λ2)|(λ1,λ2)=(0,0)=16p(mpm1)5(1+β+mβ)(n1β)1pm5(p1)5n310,

    for p>p1 (i.e., mpm1>0), n1β0, p>1, m>n1>0, β>0, the change (3.8) is a homeomorphism in a small neighborhood of (0,0). According to the results in [16,17,18], system (3.7) (i.e., (3.1) or (2.2)) undergoes Bogdanov-Takens bifurcation if (λ1,λ2) changes in a small neighborhood of the origin.

    By the results in [19], we obtain the local representation of the bifurcation curves as follows:

    (i) The saddle-node bifurcation curve is

    SN={(μ1,μ2)|μ1=0,μ20}={(λ1,λ2)|8p(n1β)1+1p(mpm1)4m3(p1)3n21λ1+8p(n1β)(mpm1)4m3(p1)3n21λ2+o((λ1,λ2))=0,μ20}.

    (ii) The Hopf bifurcation curve is

    H={(μ1,μ2)|μ2=μ1,μ1<0}={(λ1,λ2)|8p(mpm1)4(n1β)1+1pm3(p1)3n21λ1+8(mpm1)3p(1+β+mβ)m3(p1)3n21λ2+o(|λ1,λ2|)=0,μ1<0}.

    (iii) The homoclinic bifurcation curve is

    HL={(μ1,μ2)|μ2=57μ1,μ1<0}={(λ1,λ2)|200p(mpm1)4(n1β)1+1p49m3(p1)3n21λ1+200(mpm1)3p(1+β+mβ)49m3(p1)3n21λ2+o(|λ1,λ2|)=0,μ1<0}.

    The Bogdanov-Takens bifurcation diagram and the phase portraits of system (3.1) are shown in Figure 1. The small neighborhood of the origin in the parameter (λ1,λ2)-plane are divided into four regions (see Figure 1(a)) by bifurcation curves H, HL, and SN.

    Figure 1.  The bifurcation diagram and the phase portraits of system (3.1) for m=2, p=2, n=1.4, β=0.1 and A=4.5607017. (a) Bifurcation diagram; (b) No positive equilibria for (λ1,λ2)=(0.1,0.13)I; (c) An unstable focus for (λ1,λ2)=(0.1,0.1145)II; (d) An unstable limit cycle for (λ1,λ2)=(0.1,0.11345)III; (e) An unstable homoclinic loop for (λ1,λ2)=(0.1,0.11289) on HL; (f) A stable focus for (λ1,λ2)=(0.1,0.096)IV. E1 and E2 are the equilibria of system (3.1), near E1 and E2, respectively.

    (a) The unique positive equilibrium is a cusp of codimension two if (λ1,λ2)=(0,0).

    (b) There are no equilibria if (λ1,λ2)I (see Figure 1(b)), implying the diseases die out.

    (c) The unique positive equilibrium E is a saddle-node if (λ1,λ2) lies on SN.

    (d) If the parameters λ1,λ2 cross SN into the region II, the saddle-node bifurcation occurs, and there are two positive equilibria E1 and E2 which are saddle and unstable focus respectively (see Figure 1(c)).

    (e) If the parameters λ1,λ2 cross H into III, an unstable limit cycle will appear through the subcritical Hopf bifurcation around E2 (see Figure 1(d)). The focus E2 is stable in region III, whereas it is an unstable weak focus of order one on H.

    (f) If (λ1,λ2)HL, an unstable homoclinic orbit will occur through the homoclinic bifurcation around E1 (see Figure 1(e)).

    (g) If the parameters λ1,λ2 cross the HL curve into IV, the relative location of one stable and one unstable manifold of the saddle E1 will be reversed (compare Figure 1(c), (f)).

    We study Hopf bifurcation around the equilibrium E2(x2,y2) in this subsection. Let

    a=mpmβm1β+1.

    To simplify the computation, we follow our previous techniques in [20,21] and take the changes

    ˉx=xx2,ˉy=yy2,τ=xp2t, (3.9)

    under which system (2.2) is reduced to (we rewrite τ as t)

    {dˉxdt=ˉxp1+βxp2ˉxp(Ax2ˉxnˉy)mxp2x,dˉydt=1xp2(ˉxˉy). (3.10)

    Setting

    ˉA=Ax2,ˉβ=βxp2,ˉm=mxp2,a=1xp2, (3.11)

    and dropping the bars, system (3.10) becomes

    {dxdt=xp1+βxp(Axny)mx,dydt=a(xy). (3.12)

    Since the equilibrium E2(x2,y2) of system (2.2) becomes the equilibrium (1,1) of system (3.12), we have

    A=mβ+m+n+1. (3.13)

    Note that the positive equilibrium E(x,y) of system (3.12) satisfies that y=x and h(x)=0, where h(x) is given by (2.6). From the discussion of h(x) in Section 2, we have h(1)>0 since 1 is the bigger positive root of h(x). By (2.7) and (3.13), one gets

    h(1)=mβ+m+n+1pm.

    Thus, we have the following condition

    mβ+m+n+1>pm. (3.14)

    This yields that the condition (2.4) becomes

    β,A,m,n,a>0,(pβ1)m1<n<ma. (3.15)

    Next letting dt=(1+βxp)dτ and substituting (3.13) into (3.12), one obtains (still denote τ by t)

    {dxdt=xp(mβ+m+n+1xny)m(1+βxp)x,dydt=a(xy)(1+βxp), (3.16)

    where β,A,m,n,a satisfy (3.15). Since 1+βxp>0 holds in R+2={(x,y)|x0, y0}, the topological structure of (3.16) is the same as (3.12).

    In what follows we study the Hopf bifurcation around ˜E2(1,1) in system (3.16), instead of E2(x2,y2) in system (2.2). We always assume that the conditions in (3.15) hold for (3.16).

    Theorem 3.2. System (3.16) has an equilibrium at ˜E2(1,1). Moreover, it is

    (I) an unstable node or focus if a<a;

    (II) a stable node or focus if a>a;

    (III) a weak focus or a center if a=a.

    Proof. The Jacobian matrix of system (3.16) at ˜E2(1,1) is

    J(˜E2)=(mpmβm1na(1+β)a(1+β)).

    Then

    Det(J(˜E2))=a(1+β)(mβ+m+n+1pm)=a(1+β)h(1).

    By(3.14), Det(J(˜E2))>0. The trace of J(˜E2) is

    Tr(J(˜E2))=mpmβm1a(β+1).

    By conditions (3.15), we have that Tr(J(˜E2))=0 (>0 or <0) if a=a (a<a or a>a). This completes the proof.

    Next we study Hopf bifurcation around ˜E2(1,1) in system (3.16). By Theorem 3.2, if Hopf bifurcation occurs, then

    a=a,β>0,m>0,1+β+1m<p<1+β+1+nm,0<n<ma. (3.17)

    Firstly the following inequality shows the transversality condition holds:

    ddatr(J(˜E2))|a=a=(β+1)<0.

    We are going to calculate the first Lyapunov constant for ˜E2(1,1). Take the changes X=x1, Y=x1, and let a=a. System (3.16) becomes (we rewrite X,Y as x,y, respectively)

    {˙x=a10x+a01y+a20x2+a11xy+a30x3+a21x2y+a40x4+a31x3y+a50x5+a41x4y+O(|x,y|6),˙y=b10x+b01y+b20x2+b11xy+b30x3+b21x2y+b40x4+b31x3y+b50x5+b41x4y+O(|x,y|6), (3.18)

    where

    a10=mpmβm1, a01=n, a20=p(mp2mβm2)2, a11=pn,a30=p(p1)(mp3mβ2m3)6,a21=p(p1)n2,a40=p(p1)(p2)(mp4mβ3m4)24,a31=p(p1)(p2)n6,a50=p(p1)(p2)(p3)(mp5mβ4m5)120,a41=p(p1)(p2)(p3)n24,b10=a10, b01=a10,b20=pβa101+β,b11=b20,b30=12(p1)b20,b21=b30,b40=16(p1)(p2)b20,b31=b40,b50=124(p1)(p2)(p3)b20,b41=b50.

    By the formula in [14], one gets the first Lyapunov coefficient with the aid of Maple-17 as follows

    V3=pn2(mpβ+1)(c0+c1m)8(mβ+m+n+1pm)(1+β)2, (3.19)

    where

    c0=(n+1)[(β1)p+β+1],c1=2p2+(β+1)(β3)p+(β+1)2.

    The program for the computation of Lyapunov coefficient is available for noncommercial purpose via email to: gnsydyf@126.com.

    By conditions in (3.17), the sign of V3 is the same as that of

    φ1=c0+c1m. (3.20)

    Now we investigate whether there exist some parameters such that φ1=0 (i.e., V3=0) under the conditions (3.17).

    Lemma 3.3. If conditions in (3.17) hold, then we have c1>0.

    Proof. We will show that c1(p)>0 for all p>1. A straightforward calculation shows that

    c1(p)=4p+(β+1)(β3),c1(p)=4.

    Then c1(p)>c1(1)=(β1)20 for all p>1. This implies that c1(p) is strictly monotonically increasing on (1,+). Note that

    c1(1)=2+(β+1)(β3)+(β+1)2=2β2>0.

    Thus, c1(p)>c1(1)>0 for all p>1. This completes the proof.

    Denote

    ˜m=c0c1,p=1+β1β.

    Note that c0>0 if and only if either (i) β1, or (ii) β<1 and pp. Furthermore, we have c0=0 if and only if β<1 and p=p, c0<0 if and only if β<1 and p>p, respectively. By the above discussions, one obtains the following theorem.

    Theorem 3.4. If conditions in (3.17) hold, then the following statements hold.

    (I) If either (i) β1, or (ii) β<1 and pp (i.e., φ1>0 or V3>0), then ˜E2(1,1) is an unstable weak focus of order one.

    (II) If β<1 and p>p and

    (II.1) m>˜m (i.e., φ1>0 or V3>0), then ˜E2(1,1) is an unstable weak focus of order one;

    (II.2) m<˜m (i.e., φ1<0 or V3<0), then ˜E2(1,1) is a stable weak focus of order one;

    (II.3) m=˜m (i.e., φ1=0 or V3=0), then ˜E2(1,1) is a center or a weak focus of order at least two.

    Define two hypersurfaces

    H1:a=a,φ1>0,andH2:a=a,φ1<0.

    By Theorems 3.2 and 3.4, we know that ˜E2(1,1) is an unstable focus (resp. a stable focus) when φ1>0 and aa (resp. φ1<0 and aa), while ˜E2(1,1) is a stable focus (resp. an unstable focus) as φ1>0 and a>a (resp. φ1<0 and a<a). Hence, if parameters pass from one side of the surface H1 (resp. H2) to the other side, system (3.16) can undergo a subcritical (resp.supercritical) Hopf bifurcation. An unstable limit cycle (resp. a stable limit cycle) can bifurcate from the small neighborhood of ˜E2(1,1). The hypersurface H1 (resp. H2) is called the subcritical (resp. supercritical) Hopf bifurcation hypersurface of system.

    In Figure 2, we give the limit cycles arising from Hopf bifurcation around ˜E2(1,1) of system (3.16). In Figure 2(a), we fix p=2, β=0.2, m=1.4 and n=10, and get a=0.1 from tr(J(˜E2))=0, then we obtain V3=1.62280702. Next perturb a such that a decreases to 0.099. So ˜E2(1,1) becomes an unstable hyperbolic focus, yielding to a stable limit cycle to appear around ˜E2(1,1). In Figure 2(b), we fix p=2, β=0.2, m=2 and n=3. Using the same arguments as above, we obtain an unstable limit cycle around ˜E2(1,1).

    Figure 2.  (a) A stable limit cycle bifurcated by the supercritical Hopf bifurcation of the system (3.16) with p=2, β=0.2, m=1.4, n=10 and a=0.099. (b) An unstable limit cycle bifurcated by the subcritical Hopf bifurcation of the system (3.16) with p=2, β=0.2, m=2, n=3 and a=0.53.

    By (II.3) of Theorem 3.4, V3=0 if m=m. Using the formal series method in [14] and Maple-17, one gets the second Lyapunov constant

    V5=pn4(p+1)(2p1)(pβ1)φ2288(1+β)2c1, (3.21)

    where c1 is given by (3.19) and

    φ2=pβ(pβp+β+1)n+(1+β)(p1)(pβ2p+β+1).

    Lemma 3.5. If (3.17) and the condition (II.3) of Theorem 3.4 hold, then V5>0.

    Proof. From the condition (II.3) of Theorem 3.4, we have β<1 and pβp+β+1>0. This follows that pβ2p+β+1<0. Thus, φ2<0, which implies V5>0.

    Theorem 3.6. The equilibrium E2(x2,y2) of system (2.2) is an unstable weak focus of order at most two. System (2.2) can undergo degenerate Hopf bifurcation of codimension two in the small neibourhoof of E2(x2,y2).

    Proof. Since the equilibrium ˜E2(1,1) in system (3.16) corresponds to E2(x2,y2) in system (2.2), we are going to focus on ˜E2(1,1) of system (3.16) in this proof, instead of E2 in system (2.2).

    For convenience, denote V1=tr(J(˜E2)). By Theorem 3.4 and Lemma 3.5, for any given parameters (p1,β1,n1,a1,m1) satisfying (3.17) and the condition (III.3) of Theorem 3.4, i.e.,

    a1=a,m1=˜m,β1>0,1+β1+1˜m<p1<1+β1+1+n1˜m,0<n1<˜ma,

    we have V1(p1,β1,a1,m1)=V3(p1,β1,n1,m1)=0 and V5(p1,β1,n1)>0. Therefore, ˜E2(1,1) in system (3.16) is a weak focus of order at most 2.

    Now we show that two limit cycles can bifurcate from ˜E2(1,1), which means that the Hopf cyclicity for the equilibrium ˜E2(1,1) is 2. We first perturb m near m1 such that V3V5<0 and adjust a such that V1=0. Then the first limit cycle appears. The second limit cycle is obtained by perturbing a such that V1V3<0, see Figure 3. Therefore, system (3.16) can undergo degenerate Hopf bifurcation of codimension two near ˜E2(1,1).

    Figure 3.  Coexistence of two limit cycles around the focus ˜E2(1,1) bifurcated by the degenerate Hopf bifurcation of codimension two of system (3.16) with p=2.4, β=0.2, n=5.8, m=0.995 and a=1/60.002.

    In the end of this section we give a numerical simulation in Figure 3 to show the coexistence of two limit cycles. Choosing p=2.4, β=0.2 and m=1, we deduce that n=5.8, a=1/6 by V3=0 and tr(J(˜E2))=0, respectively, and V5=115.8683452, i.e., ˜E2(1,1) is an unstable weak focus of order two. Then we perturb m and a such that m and a decreases to 10.005 and 1/60.002, respectively. An unstable limit cycle and a stable limit cycle occur around ˜E2(1,1), see Figure 3.

    This work is supported by the NNSF of China (No.11971495) and Guangdong-Hong Kong-Macau Applied Math Center (No.2020B1515310014).

    The authors declare there is no conflict of interest.



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