An optimal adaptive time-stepping scheme for solving reaction-diffusion-chemotaxis systems

doi:10.3934/mbe.2007.4.187

Mathematical Biosciences and Engineering, 2007, 4(2): 187-203. doi: 10.3934/mbe.2007.4.187. 65N06, 65N12, 65N55, 92-08.

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An optimal adaptive time-stepping scheme for solving reaction-diffusion-chemotaxis systems

1. Department of Mathematics, Michigan State University, East Lansing, MI 48864
2. Department of Applied Mathematics, Providence University, Taichung

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Reaction-diffusion-chemotaxis systems have proven to be fairly accurate mathematical models for many pattern formation problems in chemistry and biology. These systems are important for computer simulations of patterns, parameter estimations as well as analysis of the biological systems. To solve reaction-diffusion-chemotaxis systems, efficient and reliable numerical algorithms are essential for pattern generations. In this paper, a general reaction-diffusion-chemotaxis system is considered for specific numerical issues of pattern simulations. We propose a fully explicit discretization combined with a variable optimal time step strategy for solving the reactiondiffusion- chemotaxis system. Theorems about stability and convergence of the algorithm are given to show that the algorithm is highly stable and efficient. Numerical experiment results on a model problem are given for comparison with other numerical methods. Simulations on two real biological experiments will also be shown.

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Keywords: equations; chemotaxis; systems; reaction; explicit methods. ; diffusion; pattern formation problems

Citation: Chichia Chiu, Jui-Ling Yu. An optimal adaptive time-stepping scheme for solving reaction-diffusion-chemotaxis systems. Mathematical Biosciences and Engineering, 2007, 4(2): 187-203. doi: 10.3934/mbe.2007.4.187

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