Citation: Judit Faus-Garriga, Isabel Novoa, Andrés Ozaita. mTOR signaling in proteostasis and its relevance to autism spectrum disorders[J]. AIMS Biophysics, 2017, 4(1): 63-89. doi: 10.3934/biophy.2017.1.63
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Proteostasis, or protein homeostasis, controls proteome by regulating mRNA targeting, proper protein synthesis, folding, trafficking and degradation [1], all necessary processes to keep cell functionality [2].
The processes in the cell involved in protein homeostasis can be grouped in those contributing to the synthesis of new proteins (mRNA processing, transport and translation) and those involving protein degradation or removal (chiefly, the ubiquitin-proteasome system and the autophagy-lysosome system). Other cellular mechanisms described to respond to protein unbalance or misfolding, as those encompassing cellular stress responses including the endoplasmic reticulum unfolded protein response [3], will not be addressed in this review.
In the neuronal context, proteostasis mechanisms are intimately associated to brain function. Notably, some forms of autism have been associated to the deregulation of proteostasis [4]. Neurons are polarized cells with long dendritic and axonal projections that receive information through highly specialized subcellular compartments called synapses. One neuron may contain around 10,000 to 30,000 of them. Synapses may be located close, or certainly far from the cell body, meaning that neurons need mechanisms that allow those synapses to function, to some degree, in an autonomous way, but coordinated with the cell body, to respond to local activity as well as to local signaling cues. This is partially supported by the segregation of axonal and somatodendritic membrane micro-domains that limit the diffusion of specific membrane components [5]. In addition, spatially-segregated protein synthesis contributes to the maintenance of neuronal compartments functionally differentiated [6]. We will focus in this review on those mechanisms characterized at the synaptic level. When the presynaptic terminal sends a signal to a specific postsynaptic terminal across the synaptic cleft, the postsynaptic terminal undergoes activity-dependent protein composition changes. These local protein modifications in abundance and activity are the bases supporting synaptic plasticity, thus altering the characteristics of that exact synapse. Those plasticity mechanisms might turn the synapse more efficiently coupled to the presynaptic signal, through potentiation processes (short-term, or long-term potentiation, depending on their duration), or may reduce the coupling between presynaptic and postsynaptic sides, through depression processes (short-term or long-term depression) [7,8]. This plasticity can be bidirectional, since postsynaptic terminals may produce retrograde diffusible messengers to affect presynaptic activity. This is, for example, the case of nitric oxide [9] or endocannabinoids [10] that affect presynaptic function.
To achieve activity-dependent protein composition changes in response to input signals, rapid alterations in local protein synthesis and function are necessary [11,12]. In fact, synaptic plasticity implies morphological and functional changes controlled by the spatial restriction of protein translation [13,14] and protein degradation [15]. Thus, local proteostasis determines proper plasticity in synapses.
Proteostasis deregulation underlies some forms of autism spectrum disorder (ASD) [16]. These are neurodevelopmental disorders characterized by the impairment of the child's ability to communicate and interact with others, and the appearance of restricted repetitive behaviors causing a wide range of social or occupational dysfunction [17]. The etiology of most forms of autism is unknown, although there is a clear genetic association [18,19]. For those cases of ASD with an identified etiology, it has been observed that in many occasions those genes affected are involved in synaptic protein homeostasis (Table 1). Interestingly, the deregulation of protein homeostasis found in a number of ASDs is largely associated to an intracellular signaling pathway, the mechanistic/mammalian target of rapamycin (mTOR) pathway. This signaling pathway is known to support synaptic plasticity in the brain by controlling protein synthesis and degradation [15,20,21]. The present review is particularly focused on those synaptic processes in proteostasis where mTOR signaling seems to play a relevant role given the characteristics of the disorders associated to its dysfunction.
Gene | Disorders | Function | Reference |
CELF1/CUG-BP1 | Myotonic dystrophy, type 1 | RNA binding protein | [163] |
DISC1 | ASD/Asperger syndrome, Schizophrenia (SCZ) | Multifunctional interacting protein | [164,165] |
ELAVL3 | ASD | RNA binding protein | [166,167] |
FMR1 | ASD, Attention Deficit Hyperactivity Disorder (ADHD), Developmental Delay (DD), Epilepsy (EP) Intellectual Disability (ID) | RNA binding protein | [168,169,170] |
RBFOX1 | ASD, DD, EP, ID | RNA binding protein | [171,172,173] |
RNPS1 | ASD, DD, ID | RNA binding protein | [174] |
SNRPN | ASD | Tissue-specific alternative RNA processing | [175,176] |
MECP2 | ASD, ADHD, DD, EP, ID, SCZ | Methylation-dependent transcriptional repression activity, RNA processing | [177,178,179] |
DOLK | ASD, EP, ID | Dolichol kinase, glycosylation | [180] |
PTEN | ASD, ADHD, DD, EP, ID | Phosphatase: mTOR negative regulator via PI3K | [181,135,182] |
NF1 | ASD | Ras GTPase: Ras-MAPK negative regulator | [183,126] |
TSC1 | ASD, DD, ID | GTPase activator protein: mTOR negative regulator via Rheb | [168,184] |
TSC2 | ASD, DD, EP, ID | GTPase activator protein: mTOR negative regulator via Rheb | [121,184,185] |
CUL3 | ASD, SCZ | E3-ubiquitin ligase | [186,187] |
CUL7 | ASD | E3-ubiquitin ligase | [166,167] |
HECW2 | ASD | E3-ubiquitin ligase | [166,167] |
HERC2 | ASD, DD, ID | E3-ubiquitin ligase | [188,189] |
HUWE1 | ASD, DD, ID | E3-ubiquitin ligase | [190,191] |
RNF135 | ASD | E2-dependent E3-ubiquitin ligase | [192] |
UBE2H | ASD | Ubiquitin ligase | [193] |
UBE3A | ASD, DD, EP, ID | E3-ubiquitin ligase | [194,195] |
UBE3B | ASD, DD, ID | E3-ubiquitin ligase | [196,197] |
UBE3C | ASD | E3-ubiquitin ligase | [187] |
UBL7 | ASD, ID | Ubiquitin binding | [198] |
UBR5 | ASD, EP | E3-ubiquitin ligase | [199,167] |
UBR7 | ASD | E3-ubiquitin ligase | [200] |
USP7 | ASD, DD, ID | Deubiquitination | [201,166] |
USP9Y | ASD | Polyubiquitin hydrolase | [202] |
PSMD10 | ASD, SCZ | Non-ATPase proteasome subunit of the 19S regulator: protein degradation | [203] |
PYHIN1 | ASD | Transcriptional regulation | [204,167] |
CAPN12 | ASD | Calcium-regulated non-lysosomal thiol-protease | [166,205] |
DPP4 | ASD | Serine exopeptidase | [204,206] |
DPP6 | ASD, ADHD, ID, TS | Promotes cell surface expression of the KCND2 potassium channel | [207,208,209] |
DPP10 | ASD | Promotes cell surface expression of the KCND2 potassium channel | [171,208] |
Gene code and corresponding protein name, CELF1/CUG-BP1: CUG triple repeat RNA binding protein 1; DISC1: disrupted in schizophrenia 1 protein; ELAVL3: ELAV-like protein 3; FMR1: fragile X mental retardation protein; RBFOX1: RNA binding protein fox-1 homolog; RNPS1: RNA binding protein with serine-rich domain 1; SNRPN: small nuclear ribonucleoprotein polypeptide N; MECP2: methyl-CpG-binding protein 2; DOLK: dolichol kinase; PTEN: phosphatase and tensin homolog; NF1: neurofibromin; TSC1/2: tuberous sclerosis complex 1/2; CUL3: cullin-3; CUL7: cullin-7; HECW2: HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2; HERC2: HECT and RLD domain containing E3 ubiquitin protein ligase 2; HUWE1: HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase; RNF135: ring finger protein 135; UBE2H: ubiquitin conjugating enzyme E2 H; UBE3A: ubiquitin protein ligase E3A; UBE3B: ubiquitin protein ligase E3B;UBE3C: ubiquitin protein ligase E3C; UBL7: ubiquitin-like 7; UBR5: ubiquitin protein ligase E3 component N-recognin 5; UBR7: ubiquitin protein ligase E3 component N-recognin 7; USP7: ubiquitin specific peptidase 7; USP9Y: ubiquitin specific peptidase 9, Y-linked; PSMD10: proteasome 26S subunit, non-ATPase 10; PYHIN1: Pyrin and HIN domain family member 1; CAPN12: calpain 12; DPP4: dypeptidyl peptidase like 4; DPP6: dypeptidyl peptidase like 6; DPP10: dypeptidyl peptidase like 10. |
As mentioned above, synaptic proteostasis will depend on cellular processes resulting in the synthesis of new proteins, or removing pre-existing ones, directed by synaptic activity triggered by the surrounding stimuli.
Newly synthesized mRNAs are transported to translation sites outside the nucleus. The regulation of this process is crucial for synaptic protein homeostasis and plasticity [22]. mRNA molecules have been found on dendrites close to the synapse to support, through controlled translation, synapse plasticity in a stimulus-dependent fashion [23]. In this way, swift changes in protein composition may rapidly respond to neighboring stimuli in a spatially and temporally restricted manner [24,25]. Notably, mRNA local translation regulation is one of the crucial processes supporting the synaptic tagging and capture hypothesis [26]. This hypothesis explains those synaptic alterations necessary discriminate specific synapses in the context of the formation of lasting memories. Thus, stimulated synapses are first tagged by activity-derived modifications, which subsequently capture plasticity related proteins/particles (PRPs), synthesized after synaptic stimulation, allowing plasticity, and therefore memory consolidation-prone modifications, in those previously tagged synapses [26,27]. Hence, the synaptic tagging and capture hypothesis incorporates those cellular processes relevant for mRNA transport and local translation regulation (see below) [28,29].
mRNA molecules may have different elements that support their specific targeting and modulation at synapses. Localization elements or molecular zipcodes are sequence and structural cis- elements in mRNA molecules that determine their localization. In general, zipcodes are mostly found in 3' UTR, and less frequently found in 5' UTR. The targeting of mRNAs to dendrites requires dendritic targeting elements (DTEs) to be bound by trans-acting RNA-binding proteins (RBPs). DTEs have been detected in CaMKIIα [30], β-actin [31], MAP2 [32], Arc [33] and BDNF [34].
Another level of proteostasis control at the synapses is mediated by local RNA splicing. It has been described the presence of spliceosomes in synaptic terminals, so it is thought that regional splicing is also a point of protein translation regulation in synapses [35]. Moreover, it has been proved that several RBPs, such as Sam68, are implicated in splicing [36,37]. In addition, there are mRNAs containing zipcodes in intronic regions [38]. These are known as cytoplasmic intron-sequence retaining transcripts (CIRT), which have been shown to be abundant in brain mRNAs, targeting them to dendrites [39]. Altogether, mRNA transport into dendritic compartments is required to support postsynaptic stimuli-dependent plasticity [24,25].
The localization elements in mRNA molecules are recognized by specific RBPs, which then are bound by other accessory proteins, creating messenger ribonucleoprotein (mRNP) granules [40]. At that point, these macrocomplexes are responsible of mRNA protection from nucleases, its cellular transport and its local translational regulation [25,41]. The mRNP granule transport to the dendrite of destination is carried out by microtubules [42,43]. To this end, mRNP granules have several crucial elements: RBPs, which are in charge of preventing translation before delivering, adaptors to cytoskeletal machinery and molecular motors [44].
After mRNP granules arrive to dendrites, mRNA's translation must be regulated so that proteostasis is preserved. RBPs attached to the mRNA molecules play a key role at this point, acting as repressors or promoters of translation [4,28]. Depending on the local synaptic stimulation, the RBPs attached to the mRNA molecule critically determine whether the attached mRNA is translated in order to support long-lasting forms of synaptic plasticity or not [45]. Once the synaptic input arrives, it takes place a signaling cascade that ends with the modification of RBPs. Consequently, the RBPs' affinity to its mRNA cargo is changed, thus regulating the translation of the mRNA molecule [45]. For instance, FMRP1 (fragile mental retardation protein), ZBP1 (zipcode-binding protein) or CPEBs (cytoplasmic polyadenylation element binding proteins) are RBPs that attached to an mRNA molecule function as translation repressors [46,47,48], whereas Sam68 promotes mRNA translation when bound to it [49,50].
The case of β-actin is useful to illustrate mRNA translation regulation by RBPs in dendrites. β-actin mRNA is linked to ZBP1 [51] and Sam68 [52] at the same time. When an input signal arrives, ZBP1 might be phosphorylated. This phosphorylation lowers ZBP1, but not Sam68, affinity to β-actin mRNA, allowing its translation, which is further enhanced by bound Sam68 [47,49]. In the case of CPEBs, CPEB1 to 4 have been described in the brain, and more specifically at the dendrites, where they regulate synaptic plasticity [48]. CPEB1, the founding member of this family, blocks mRNA translation of its target mRNAs by binding to the CPE (cytoplasmic polyadenylation element) present at the 3' UTR. Furthermore, by binding to neuroguidin, it prevents the assembly of the eIF4E-eIF4G components of the translation initiation complex [53,54]. Following activation signals, CPEB1 promotes translation initiation by poly(A) tail elongation and binding of poly(A)-binding proteins (PABPs), which recruit eIF4G to compete with neuroguidin for the binding of eIF4E [55]. Signaling through NMDA (N-methyl-D-aspartate) glutamate receptors present at synapses regulate CPEBs and their target mRNAs: CPEB1 inhibits translation of its target mRNAs until NMDA type-mediated glutamate receptor activation stimulates its phosphorylation by either Aurora kinase A or CaMKIIα, resulting in increased mRNA polyadenylation and translation at synapses [56]; other CPEBs such as CPEB3 shows a different mechanism. CPEB3 must be cleaved by calpain 2 after NMDA glutamate receptor signaling, which results in the translation of CPEB3-targeted/repressed mRNAs such as the AMPA-2 (α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid) glutamate receptor [57].
Several neurological disorders are related to RBPs dysfunction. Among them, FMRP has the characteristics of a RBP [58] and its expression is disrupted in FXS [59]; disrupted in schizophrenia 1 (DISC1), a RBP mutated in this disorder, is vital for dendritic mRNA transport and synaptic plasticity [60]; TDP-43 (transactive response DNA-binding protein 43) regulates splicing, mRNA stability, mRNA transport, translation and synaptic function in motoneurons [61], and it is found deregulated in amyotrophic lateral sclerosis [62]. Interestingly, CPEB1 removal in the context of the mouse model for FXS, a model where FMRP is not expressed, showed that CPEB1 depletion improves the neuronal deficit including affected synaptic plasticity and memory alterations. This genetic rescue suggests that the proteostasis unbalance produced by FMRP absence can be prevented by CPEB1 deficiency [63]. Other cases of mutations affecting RBPs with neurological consequences are detailed in Table 1.
Once mRNA molecules get to their translation site, in addition to its translational control by bound RBPs and splicing, they must find a supportive environment for translation. These favorable conditions are provided by signaling pathways involved in the regulation of translation initiation, the most limiting step in mRNA translation [64,65]. The process of translation initiation of a mRNA requires the recognition of the cap structure at the 5' end and the recruitment of the ribosome by multiple eukaryotic initiation factors (eIFs). The heteromeric eIF4F complex consists of the cap binding protein eIF4E, the RNA helicase eIF4A, and the protein eIF4G, and all these translation initiation factors are targets of different regulators to finely control protein synthesis [66]. Finally, the translation initiation factor 4B (eIF4B) stimulates eIF4F complex by potentiating the eIF4A RNA helicase activity [66]. Interestingly, the activity of several components of the eIF4F complex is controlled by regulators, such as mTORC1 [67] or MAPK (mitogen‐activated protein kinase) [68] signaling pathways, which stimulates cell translational machinery. eIF4E is the less abundant initiation factor, and its function is sequestered by 4E-binding proteins (4E-BPs), an interaction that is prevented by mTORC1 activity, thus allowing the translation of the mRNA [65]. In addition, eIF4E is phosphorylated by MNK (MAPK interacting protein kinase) activation, which also promotes eIF4F complex activity [69]. The relevance of these mechanisms in the local protein synthesis at the neuronal level is supported by the presence of mTORC1 signaling pathway and eIF4F complex components in dendritic compartments [70]. The mTOR pathway will be further described in the context of ASD below.
Degradation regulation is essential to maintain proteostasis in neurons. The ubiquitin-proteasome system and the autophagy-lysosome system are the most relevant proteolytic systems in most cell types [71]. The ubiquitin-proteasome system would be responsible to target misfolded and short-lived proteins, while the autophagy-lysosome system would mediate the degradation of long-lived proteins and organelles [71].
The ubiquitin-proteasome system involves the conjugation of several ubiquitin proteins, a 76-amino acid protein, to substrates that must be degraded by the proteasome [72,73]. The poly-ubiquitin chain can be removed or shortened by deubiquitinating enzymes, providing reversibility to the ubiquitination reaction. As a whole, the ubiquitin-proteasome system is highly regulated at all steps [74]. The initial attachment of the poly-ubiquitin chain to the target protein to be degraded occurs through specific enzymatic steps mediated by E3s (ubiquitin ligases), which provides substrate/target specificity. The other enzymes involved are E2s (ubiquitin-conjugating enzymes) and E1 (ubiquitin-activating enzyme) [75]. The normal activity of the ubiquitin-proteasome system is necessary for proper synaptic function [73,76,77]. The proteasome has a relevant role in the synaptic tagging and capture hypothesis of synaptic plasticity [26]. This complex is sequestered in dendritic spines by local synaptic activity [78]. Therefore, protein degradation via proteasome seems essential for the structural and functional changes associated to synaptic plasticity, through the degradation of inhibitory constrains such as translation repressors involved in the establishment of synaptic plasticity [79]. For example, the inhibition of the ubiquitin-proteasome system promotes the accumulation of BDNF (brain-derived neurotrophic factor) creating conditions that potentiate long-term synaptic plasticity [26,80].
Deregulation of the ubiquitin-proteasome system is associated with aging and neurodegenerative diseases [81]. In FXS, there are reports of abnormalities either in the transport of proteasome subunits and ubiquitin ligases (E3) into dendritic spines, or in the activity-dependent ubiquitination of synaptic proteome [82]. Interestingly, there is an interplay between proteasome-mediated protein degradation and protein synthesis control in synaptic plasticity through the mTORC1 pathway [83]. Notably, a number of mutations, in genes encoding for components of the ubiquitin-proteasome system, have been described associated with increased autism susceptibility (Table 1), illustrating the relevance of synaptic protein degradation in neuronal function.
The autophagy-lysosome system manages the transport of cytosolic elements to the lysosome. This transport to lysosome might be chaperone-mediated, directed by the formation of the autophagosome, as is the case of macroautophagy, or directly mediated by the lysosome in a pynocytosis-like event called microautophagy [84]. Autophagosomes merge with lysosomes allowing the degradation of the target content, and contributing to protein homeostasis regulation. Autophagy in neurons is constitutively active and this activity is critical for neuronal survival [85]. The cytosolic elements potentially processed by the autophagy-lysosome system are aged proteins, pathogenic protein aggregates and damaged organelles [86]. The dysfunction of the autophagy-lysosome system is especially relevant to pathological conditions such as neurodegenerative disorders [87], and has been recently associated to ASD [88]. Proper autophagic activity would be relevant during neurodevelopment to perform adequate synaptic pruning, a significant neurodevelopmental process of synapse elimination that occurs between early childhood and the onset of puberty [89,90]. Notably, at the molecular level, mTOR signaling inhibits autophagy(Figure 1) by phosphorylating the ULK1 complexes (UNC-51 like kinase) [87,91]. Therefore, the unbalanced activity of the mTOR signaling seems to be related with the alterations in autophagy and the deficits in spine pruning characteristic of ASDs [88].
In summary, synaptic proteostasis, maintained by different cellular mechanisms described in neurons, involves the synthesis and degradation of proteins driven by synaptic activity and the neuronal context, to support synaptic functionality (Figure 1). Among the signaling pathways involved, the PI3K (phosphoinositide 3-kinase)/mTOR and the ERK/MNK pathways are the most relevant molecular mechanisms implicated in synaptic proteostasis.
mTOR is a serine/threonine kinase that forms two functionally distinct signaling complexes, mTORC1 (mTOR complex 1) and mTORC2 (mTOR complex 2) [92]. Both complexes share a number of common proteins: mTOR, DEPTOR, LST8/GβL, Tel2 and Tti1 (see Figure 2). In addition, mTORC1 specifically includes RAPTOR and PRAS40. Instead, mTORC2 specifically includes RICTOR and mSIN1. Several specific inhibitors for mTORC1 and dual inhibitors that block mTORC1/mTORC2 activity have been characterized [93], which have allowed to study those specific processes involving mTORC1 or both mTORC1/mTORC2 [21,92]. Unfortunately, no specific inhibitors for mTORC2 have been described so far, and most data on its relevance on brain function comes from genetic targeting of mTORC2 components. Nevertheless, mTORC2 signaling is a vital regulator of actin polymerization [94,95]. In addition, RICTOR conditional deletion in mice revealed reduced mTORC2 activity and impaired long-term memory and long-term plasticity, as well as defective actin polymerization [96]. Complementarily, mTORC2 activity boosting was found to restore memory performance in aged mice [97], indicating a relevant role of this complex in neuronal function that warrants further research.
In the neuronal context, mTORC1 activation is driven by various extracellular factors such as glutamate [98], BDNF [99] or insulin [100], among others [21,101] (Figure 2). PI3K/PDK1 pathway mediates the activation of PKB/Akt downstream of membrane receptors to modify the activity of tuberous sclerosis complex (TSC), composed by the tumor suppressors TSC1 (hamartin) and TSC2 (tuberin) (Figure 2). TSC can prevent the activation of mTOR by the small GTPase Rheb, a potent activator of mTORC1 when bound to GTP. Importantly, phosphorylation of TSC by PKB/Akt prevents the inhibition of Rheb, leading to mTOR activation (Figure 2). Such mTORC1 activation results in the modulation of downstream effectors with relevance to mRNA targeting and translation, as well as to protein degradation.
mTORC1 activity contributes to synaptic tagging modulating, for example, CaMKIIa mRNA stability and expression with the participation of the RNA-binding protein HuD [102]. At the translational control, mTORC1 phosphorylates S6K, which then phosphorylates S6 ribosomal subunit, eIF4B or eEF2αK. Additionally, mTORC1 phosphorylates 4E-BP at multiple sites, disrupting 4E-BP binding to eIF4E, so the later can bind to the cap structure of the mRNA and to the other components of eIF4F complex to initiate translation [21]. Moreover, mTORC1 activity enhances the translation of 5′terminal oligopyrimidine tract-containing motif mRNAs (5'TOP mRNAs), which are mRNAs coding for ribosomal proteins, elongation factors and translation factors [103]. Together, mTORC1 signaling is involved in a number of key steps leading to mRNA translation at synaptic contacts.
mTORC1 also plays a role in protein degradation. mTORC1 activity results in the induction of the transcription factor NRF1 (also known as NFE2L1), which stimulates the increase in proteasome levels [15] (Figure 1). This extent would facilitate the recycling of amino acids from pre-existing proteins to be used in new protein synthesis. Interestingly, mTORC1 activation inhibits autophagy by phosphorylating the ULK1 complex (91). Therefore, mTORC1 is a signaling node in neuronal function, key in proteostasis with roles at different levels: RNA targeting and stability, mRNA translation, and protein degradation through the ubiquitin-proteasome system and the autophagy-lysosome system (Figure 1).
It is worth mentioning the significant crosstalk between the mTORC1 signaling and MAPK signaling in synaptic proteostasis. Additionally to PI3K-Akt-mTORC1 pathway, neuronal stimuli also trigger Ras-Raf-MEK-ERK signaling pathway, which also plays a major role in increasing global protein translation. This pathway promotes MNK and RSK phosphorylation, both having a role in mTORC1 signaling pathway (Figure 2).
Several autism susceptibility genes encode for proteins involved in proteostasis mechanisms (Table 1). There is direct evidence of the relation of several syndromic forms of ASD with alterations in the mTORC1 signaling pathway: tuberous sclerosis (TS) [104], PTEN-related disorders [105], fragile X syndrome (FXS) [106,107], MECP2 alterations (Rett syndrome [108] and MECP2 duplication syndrome [109]) and Angelman syndrome (AS) [110]. In addition, neurofibromatosis type 1 (NF1) shows an over activation of Ras-Raf-MEK-ERK signaling [111]. These disorders share synaptic alterations pointing to underlying common pathogenic processes [112]. The overstimulation of the mTORC1 cascade can be induced by direct alterations in a mTORC1 pathway component or by alterations in distant regulatory proteins [113]. This situation is associated to increased protein synthesis rates, which may underlie aberrant synaptic plasticity that characterizes the models of these disorders [112,114]. Indeed, this pathway, which has been pinpointed to have a relevant role in structural and functional synaptic plasticity [20], was found crucial in neuronal circuit development [88], most probably due to the close control it exerts over autophagy and protein synthesis in synapses [21]. Interestingly, determinations in human brain tissue from ASD patients show a higher mTORC1 activity than in control tissue, paralleled by a reduction in synapse elimination during neurodevelopment [88]. The alterations in dendritic spine density would be due to developmental synaptic pruning deficits in ASD patients. Synaptic pruning, normally performed by the autophagy-lysosome system would be abnormally inhibited in ASD preventing proper synapse elimination [88] (Figure 1). Interestingly, animal models of some of these disorders improved their neurological deficits by pharmacological inhibition with the mTORC1-specific inhibitor rapamycin or other rapamycin-like inhibitors (Table 2). This is the case for TS [104], PTEN-related disorders [115], FXS [116] and AS [117]. Furthermore, the activation of neuronal autophagy recovers synaptic function and reduces autistic-like behaviors in ASD mouse models with overstimulation of mTORC1 [88].
Tuberous sclerosis (TS) is a genetic multisystem disorder characterized by the tumorous growth or malformations (hamartomas) in skin, kidney, lung, heart, liver and brain. The central nervous system manifestations include epilepsy, intellectual disability and ASD. It is caused by heterozygous mutations in either TSC1 [118] or TSC2 [119], components of the TSC complex, where 30% of the cases are familial with autosomal dominant pattern of inheritance, and 70% of the cases are caused by de novo mutations. TSC functions as a GTP-ase activator protein for Rheb [120] (Figure 2). Since TSC inhibits mTORC1 activity, loss-of-function mutations in these proteins lead to mTORC1 TSC1/TSC2-dependent derepression (Figure 2). Several studies, at the clinical and preclinical level, suggest that mTORC1 inhibitors such as rapamycin, RAD001 and everolimus, might be useful to treat the neuronal phenotype (Table 2) of TS [121,122,123] pointing to mTORC1 hyperactivity inhibition as a valuable therapeutic approach in TS.
Disorder | Gene mutated | mTOR pathway activity | Sensitive to treatment | Reference |
Tuberous sclerosis | Tsc1 HZ in neurons | Enhanced (↑p-S6) | Rapamycin | [122] |
Tuberous sclerosis | Tsc2 HZ | Enhanced (↑p-S6K) | Rapamycin | [123] |
PTEN-related disorders | Pten in neurons | Enhanced (↑p-S6) | [105] | |
PTEN-related disorders | Pten in neurons | Enhanced (↑p-S6) | Rapamycin | [115] |
Fragile X syndrome | Fmr1 KO | Enhanced (↑p-mTOR, ↑p-S6K, ↑p-S6) | [213] | |
Fragile X syndrome | Fmr1 KO | Enhanced (↑p-S6K) | Temsirolimus | [214] |
Rett syndrome | Mecp2 KO | Reduced (↓p-mTOR, ↓p-S6K, ↓p-S6) | [108] | |
MECP2 duplication syndrome | Mecp2 duplication | Enhanced (↑p-S6K) | [151] | |
Angelman syndrome | Ube3a | Enhanced (↑p-mTOR, ↑p-S6K, ↑p-S6) | Rapamycin | [110,117] |
Neurofibromatosis type 1 (NF1) is an autosomal dominant genetic condition characterized by the formation of neurofibromiomas and other nerve tumors [124]. In addition, NF1 patients also present cognitive impairments, as well as an increased susceptibility to suffer ASD [125,126]. NF1 is caused by mutations in the NF1 gene coding the protein neurofibromin, a Ras-GTPase activating protein leading to Ras signaling inhibition [127]. NF1 loss-of-function mutations lead to an enhanced Ras activity, increasing both PI3K-mTORC1 (Table 2) and Ras-Raf-MEK-ERK signaling (Figure 2). Interestingly, inhibitors of ERK have demonstrated to recover the neurological defects of NF1 mice [128,129]. In addition, lovastatin, a 3-hydroxy-3-methyl-glutaryl-coenzyme A reductase inhibitor, has been shown to ameliorate neurological deficits in this disorder through Ras inhibition [130,131]. Interestingly, a similar approach in the fragile X syndrome mouse model revealed a decrease in protein synthesis and reduced epileptogenesis [132]. These results suggest that the pharmacological reduction of Ras activity is a relevant therapeutic approach worth exploring in the context of mTORC1 signaling deregulation.
Loss of PTEN results in familial hamartoma-tumor syndromes and brain disorders [133] associated to autism-like conditions [134,135]. PTEN is a lipid dual-specificity phosphatase that converts PIP3 to PIP2 reducing the activity of PI3K-mTORC1 pathway [136]. In the absence of PTEN function, mTORC1 activity becomes significantly increased (Figure 2). The enhancement in protein translation due to mTORC1 hyperactivation (Table 2), leads to the autism phenotype of PTEN-related conditions [105]. Rapamycin was found useful in PTEN-deficient mice as it improved the autistic-like condition in these animals [115] pointing to a therapeutic relevance of mTORC1 blockade [212].
FXS patients are characterized by their intellectual disability trait. In some patients it is accompanied by hyperactivity, hypersensitivity to sensorial stimuli, attention deficits and autistic behavior [137]. FXS is caused by an accumulation of CGG repeats on the untranslated region of the FMR1 (fragile X mental retardation 1) gene that causes the silencing of FMRP (fragile X mental retardation protein) expression, a RNA-binding protein [58]. In normal conditions, FMRP binds many different mRNA molecules [138], so in its absence, there is a broad translational deregulation of the dendritic transcriptome [138,139]. Some of the mRNA molecules under FMRP regulation are involved in mTORC1 cascade, such as the p110β subunit of PI3K and PIKE, a PI3K enhancer [140]. Then, the loss of FMRP leads to the de-repression of p110β and PIKE mRNAs, which results in an increased PI3K-mTORC1 signaling [141,213]. Other FMRP mRNA targets participating in PI3K-mTORC1 pathway are Homer1a, PSD-95, eIF4A, eIF4G, NMDA receptor and mGlu (metabotropic glutamate) receptor [142,143]. Therefore, in FMRP scarcity, translation rates increase leading to the over-activation of mTORC1 signaling pathway [107,141] (Figure 2). The global result of FMRP absence is a higher basal protein synthesis due to the lack of translation repression, and the overstimulation of mTORC1 [107,144]. Interestingly, FMRP deficiency has been associated to deficits in activity-dependent synapse elimination due to ubiquitin-proteasome system alterations in the processing of PSD-95 [145]. Many approaches have been experimentally tested in FXS mouse models, as reviewed in ref.146. Among those, the mGlu5 receptor antagonist AFQ056 (mavoglurant) failed in phase Ⅱ clinical trial [147], indicating the need for additional research on other potential therapeutic approaches.
There are two severe neurological disorders characterized by intellectual disability and autism: Rett syndrome [148,149] and MECP2 duplication syndrome [109,149]. On the one hand, Rett syndrome is caused by mutations in MECP2 (methyl-CpG-binding protein 2), an X-linked gene encoding a methylated DNA-binding protein that regulates gene expression and chromatin structure/function as a transcription activator and repressor [150]. Data from the Rett syndrome mouse model, the Mecp2 knockout mouse, mTORC1 pathway is down-regulated (Table 2), causing an abnormal synapse function [108]. On the other hand, MECP2 duplication is also responsible for a severe intellectual disability, ASD and developmental regression [109]. The mouse model for this disorder shows mTORC1 hyperactivity (Table 2), as well as an increase in spine turnover and dendritic growth [151]. Therefore, MeCP2 protein function results critical for synaptic function affecting mTORC1 activity.
Algelman syndrome (AS) is characterized by severe developmental delay, language and cognitive deficits, unusual happy conduct, epilepsy and autistic like behavior [152]. AS is caused by the deficit in expression of the maternally inherited UBE3A gene [153]. In most tissues both copies of UBE3A are expressed. However, in neurons only the expression of the maternal copy is favored due to genomic imprinting [154]. The encoded protein, ubiquitin-protein ligase E3A, transfers ubiquitin from an E2 ubiquitin-conjugating enzyme to the target protein. Several target proteins have been described for ubiquitin-protein ligase E3A: ECT2 (epithelial cell transforming sequence 2 oncogene) [155], p53 [156], p27 [157], HR23A [158], Arc [159] and ephexin-5 [160]. Patients show a decrease in dendritic spine density [161] similar to what occurs in the animal model of the disorder, the UBE3A knockout mouse [162]. Interestingly, mTORC1 over-activation is observed in the animal model of the disorder (Table 2), and pharmacological inhibition with rapamycin manages to improve motor coordination and learning and memory in this mouse model [110,117].
The maintenance of protein homeostasis involves several complementary mechanisms of protein synthesis and degradation. Neurons have specific mechanisms to support proteostasis at synapses, and proteostasis deregulation has been pinpointed as a common factor involved in a wide range of central nervous system pathologies, including ASD. Different forms of ASD share common features that converge in alterations of the mTORC1 signaling pathway. Indeed, its over-activation, as well as its under-activation results in pathological consequences that converge at the synapse. The mTORC1 pathway plays a key role in synaptic proteostasis by regulating mRNA targeting and stability, translation initiation and progression, proteasome-mediated protein degradation and autophagy; therefore, the understanding of proteostasis regulation via mTORC1 and associated Ras signaling pathways are key to define the synaptic pathophysiology of ASD. However, the role played by mTORC2 is less well understood. This is due, in part, to the lack of specific inhibitors for mTORC2 that would allow assigning relative roles of both complexes in mTOR-dependent signaling. In addition, the interplay between these two complexes is not well established in the brain, especially under those pathological conditions where mTORC1 is constitutively over-activated, as in the cases summarized in the present review. The study of specific mTORC2 inhibitors (when available), dual inhibitors for mTORC1/mTORC2, as well as specific activators of these complexes, together with the use of genetic tools, will establish the foundations for the better understanding of this signaling pathway as a therapeutic target. The identification of the de-regulated features in mTORC1 pathway at synaptic sites and the fact that this signaling pathway can be pharmacologically targeted with specific inhibitors already available, open the possibility of addressing the synaptic alterations found in different disorders by targeting a single common pathway. This possibility that has been already explored in mouse models of TS, FXS and AS, may indeed be assessed in the clinical context in the near future, given the availability of the specific inhibitors of mTORC1 and the experience accumulated in their clinical use.
In this review, we have summarized the main studies that highlight the relevance of mTOR pathway in proteostasis and ASDs. Hence, the advances in the understanding of potentially common mechanisms at the proteostasis mechanisms are important to identify and develop novel powerful therapeutic approaches that may target shared affected mechanisms.
This review was supported by grant BFU2015-68568-P (MINECO/FEDER, EU) to AO.
The authors declare no conflicts of interest in this paper.
[1] | Gumeni S, Trougakos IP (2016) Cross talk of proteostasis and mitostasis in cellular homeodynamics, ageing, and disease. Oxidative Medicine and Cellular Longevity 2016: 4587691. |
[2] | Ruegsegger C, Saxena S (2016) Proteostasis impairment in ALS. Brain Res S0006-8993: 30161–30165. |
[3] | Pluquet O, Pourtier A, Abbadie C (2015) The unfolded protein response and cellular senescence. A review in the theme: cellular mechanisms of endoplasmic reticulum stress signaling in health and disease. Am J Physiol Cell Physiol 308: C415–C425. |
[4] | Klein ME, Monday H, Jordan BA (2016) Proteostasis and RNA binding proteins in synaptic plasticity and in the pathogenesis of neuropsychiatric disorders. Neural Plast 2016: 3857934. |
[5] |
Nakada C, Ritchie K, Oba Y, et al. (2003) Accumulation of anchored proteins forms membrane diffusion barriers during neuronal polarization. Nat Cell Biol 5: 626–632. doi: 10.1038/ncb1009
![]() |
[6] |
Guillery RW (2005) Observations of synaptic structures: origins of the neuron doctrine and its current status. Philos Trans R Soc Lond B Biol Sci 360: 1281–1307. doi: 10.1098/rstb.2003.1459
![]() |
[7] |
Citri A, Malenka RC (2008) Synaptic plasticity: multiple forms, functions, and mechanisms. Neuropsychopharmacology 33: 18–41. doi: 10.1038/sj.npp.1301559
![]() |
[8] |
Kessels HW, Malinow R (2009) Synaptic AMPA receptor plasticity and behavior. Neuron 61: 340–350. doi: 10.1016/j.neuron.2009.01.015
![]() |
[9] | Hardingham N, Dachtler J, Fox K (2013) The role of nitric oxide in pre-synaptic plasticity and homeostasis. Front Cell Neurosci 7: 190. |
[10] |
Hashimotodani Y, Ohno-Shosaku T, Kano M (2007) Endocannabinoids and synaptic function in the CNS. Neuroscientist 13: 127–137. doi: 10.1177/1073858406296716
![]() |
[11] |
Casadio A, Martin KC, Giustetto M, et al. (1999) A transient, neuron-wide form of CREB-mediated long-term facilitation can be stabilized at specific synapses by local protein synthesis. Cell 99: 221–237. doi: 10.1016/S0092-8674(00)81653-0
![]() |
[12] | Huber KM,Kayser MS, Bear MF (2000) Role for rapid dendritic protein synthesis in hippocampal mGluR-dependent long-term depression. Science 288: 1254–1256. |
[13] | Bradshaw KD, Emptage NJ, Bliss TV (2003) A role for dendritic protein synthesis in hippocampal late LTP. Eur J Neurosci 18: 3150–3152. |
[14] |
Yin HH, Davis MI, Ronesi JA, et al. (2006) The role of protein synthesis in striatal long-term depression. J Neurosci 26: 11811–11820. doi: 10.1523/JNEUROSCI.3196-06.2006
![]() |
[15] |
Zhang Y, Nicholatos J, Dreier JR, et al. (2014) Coordinated regulation of protein synthesis and degradation by mTORC1. Nature 513: 440–443. doi: 10.1038/nature13492
![]() |
[16] |
Louros SR, Osterweil EK (2016) Perturbed proteostasis in autism spectrum disorders. J Neurochem 139: 1081–1092. doi: 10.1111/jnc.13723
![]() |
[17] | American Psychiatric Association, (2013) Diagnostic and Statistical Manual of Mental Disorders: DSM-5, Arlington, Virginia: USA American Psychiatric Association. |
[18] | de la Torre-Ubieta L, Won H, Stein JL, et al. (2016) Advancing the understanding of autism disease mechanisms through genetics. Nat Med 22: 345–361. |
[19] | Geschwind DH, State MW (2015) Gene hunting in autism spectrum disorder: on the path to precision medicine. Lancet Neurol 14: 1109–1120. |
[20] |
Jaworski J, Sheng M (2006) The growing role of mTOR in neuronal development and plasticity. Mol Neurobiol 34: 205–219. doi: 10.1385/MN:34:3:205
![]() |
[21] |
Bockaert J, Marin P (2015) mTOR in brain physiology and pathologies. Physiol Rev 95: 1157–1187. doi: 10.1152/physrev.00038.2014
![]() |
[22] | Bramham CR, Wells DG (2007) Dendritic mRNA: transport, translation and function. Nat Rev Neurosci 8: 776–789. |
[23] |
Wang DO, Kim SM, Zhao Y, et al. (2009) Synapse- and stimulus-specific local translation during long-term neuronal plasticity. Science 324: 1536–1540. doi: 10.1126/science.1173205
![]() |
[24] | Andreassi C, Riccio A (2009)To localize or not to localize: mRNA fate is in 3'UTRends. Trends Cell Biol 19: 465–474. |
[25] | Besse F, Ephrussi A (2008) Translational control of localized mRNAs: restricting protein synthesis in space and time. Nat Rev Mol Cell Biol 9: 971–980. |
[26] |
Redondo RL, Morris R (2011) Making memories last: the synaptic tagging and capture hypothesis. Nat Rev Neurosci 12: 17–30. doi: 10.1038/nrn2963
![]() |
[27] |
Richter JD, Klann E (2009) Making synaptic plasticity and memory last: mechanisms of translational regulation. Genes Dev 23: 1–11. doi: 10.1101/gad.1735809
![]() |
[28] |
Thomas MG, Pascual ML, Maschi D, et al. (2014) Synaptic control of local translation: the plot thickens with new characters. Cell Mol Life Sci 71: 2219–2239. doi: 10.1007/s00018-013-1506-y
![]() |
[29] |
Doyle M, Kiebler MA (2011) Mechanisms of dendritic mRNA transport and its role in synaptic tagging. EMBO J 30: 3540–3552. doi: 10.1038/emboj.2011.278
![]() |
[30] |
Mayford M, Baranes D, Podsypanina K, et al. (1996) The 3'-untranslated region of CaMKII alpha is a cis-acting signal for the localization and translation of mRNA in dendrites. Proc Natl Acad Sci USA 93: 13250–13255. doi: 10.1073/pnas.93.23.13250
![]() |
[31] |
Kislauskis EH, Li Z, Singer RH, et al. (1993) Isoform-specific 3'-untranslated sequences sort alpha-cardiac and beta-cytoplasmic actin messenger RNAs to different cytoplasmic compartments. J Cell Biol 123: 165–172. doi: 10.1083/jcb.123.1.165
![]() |
[32] | Blichenberg A, Schwanke B, Rehbein M, et al. (1999) Identification of a cis-acting dendritic targeting element in MAP2 mRNAs. J Neurosci 19: 8818–8829. |
[33] |
Kobayashi H, Yamamoto S, Maruo T, et al. (2005) Identification of a cis-acting element required for dendritic targeting of activity-regulated cytoskeleton-associated protein mRNA. Eur J Neurosci 22: 2977–2984. doi: 10.1111/j.1460-9568.2005.04508.x
![]() |
[34] |
An JJ, Gharami K, Liao GY, et al. (2008) Distinct role of long 3' UTR BDNF mRNA in spine morphology and synaptic plasticity in hippocampal neurons. Cell 134: 175–187. doi: 10.1016/j.cell.2008.05.045
![]() |
[35] |
Glanzer J, Miyashiro KY, Sul JY, et al. (2005) RNA splicing capability of live neuronal dendrites. Proc Natl Acad Sci USA 102: 16859–16864. doi: 10.1073/pnas.0503783102
![]() |
[36] |
Chawla G, Lin CH, Han A, et al. (2009) Sam68 regulates a set of alternatively spliced exons during neurogenesis. Mol Cell Biol 29: 201–213. doi: 10.1128/MCB.01349-08
![]() |
[37] |
Matter N, Herrlich P, König H (2002) Signal-dependent regulation of splicing via phosphorylation of Sam68. Nature 420: 691–695. doi: 10.1038/nature01153
![]() |
[38] | Khaladkar M, Buckley PT, Lee MT, et al. (2013) Subcellular RNA sequencing reveals broad presence of cytoplasmic intron-sequence retaining transcripts in mouse and rat neurons. PLoS One 8: 1–13. |
[39] | Buckley PT, Lee MT, Sul JY, et al. (2011) Cytoplasmic intron sequence-retaining transcripts can be dendritically targeted via ID element retrotransposons. Neuron 69: 877–884. |
[40] | Buchan JR (2014) mRNP granules. Assembly, function, and connections with disease. RNA Biol 11: 1019–1030. |
[41] | Fritzsche R, Karra D, Bennett KL, et al. (2013) Interactome of two diverse RNA granules links mRNA localization to translational repression in neurons. Cell Rep 5: 1749–1762. |
[42] |
Ivanov PA, Chudinova EM, Nadezhdina ES (2003) Disruption of microtubules inhibits cytoplasmic ribonucleoprotein stress granule formation. Exp Cell Res 290: 227–233. doi: 10.1016/S0014-4827(03)00290-8
![]() |
[43] |
Hirokawa N (2006) mRNA transport in dendrites: RNA granules, motors, and tracks. J Neurosci 26: 7139–7142. doi: 10.1523/JNEUROSCI.1821-06.2006
![]() |
[44] |
Martin KC, Ephrussi A (2009) mRNA localization: gene expression in the spatial dimension. Cell 136: 719–730. doi: 10.1016/j.cell.2009.01.044
![]() |
[45] | Kapeli K, Yeo GW (2012) Genome-wide approaches to dissect the roles of RNA binding proteins in translational control: implications for neurological diseases. Front Neurosci 6: 144. |
[46] |
Laggerbauer B, Ostareck D, Keidel EM, et al. (2001) Evidence that fragile X mental retardation protein is a negative regulator of translation. Hum Mol Genet 10: 329–338. doi: 10.1093/hmg/10.4.329
![]() |
[47] | Hüttelmaier S, Zenklusen D, Lederer M, et al. (2005) Spatial regulation of β-actin translation by Src-dependent phosphorylation of ZBP1. Nature 438: 512–515. |
[48] | Darnell JC, Richter JD (2012) Cytoplasmic RNA-binding proteins and the control of complex brain function. Cold Spring Harb Perspect Biol 4: a012344. |
[49] |
Klein ME, Younts TJ, Castillo PE, et al. (2013) RNA-binding protein Sam68 controls synapse number and local β-actin mRNA metabolism in dendrites. Proc Natl Acad Sci USA 110: 3125–3130. doi: 10.1073/pnas.1209811110
![]() |
[50] | Grange J, Belly A, Dupas S, et al. (2009) Specific interaction between Sam68 and neuronal mRNAs: implication for the activity-dependent biosynthesis of elongation factor eEF1A. J Neurosci Res 87: 12–25. |
[51] | Eom T, Antar LN, Singer RH, et al. (2003) Localization of a beta-actin messenger ribonucleoprotein complex with zipcode-binding protein modulates the density of dendritic filopodia and filopodial synapses. J Neurosci 23: 10433–10444. |
[52] |
Itoh M, Haga I, Li QH, et al. (2002) Identification of cellular mRNA targets for RNA-binding protein Sam68. Nucleic Acids Res 30: 5452–5464. doi: 10.1093/nar/gkf673
![]() |
[53] |
Jung MY, Lorenz L, Richter JD (2006) Translational control by neuroguidin, a eukaryotic initiation factor 4E and CPEB binding protein. Mol Cell Biol 26: 4277–4287. doi: 10.1128/MCB.02470-05
![]() |
[54] |
Richter JD, Sonenberg N (2005) Regulation of cap-dependent translation by eIF4E inhibitory proteins. Nature 433: 477–480. doi: 10.1038/nature03205
![]() |
[55] |
Ivshina M, Lasko P, Richter JD (2014) Cytoplasmic polyadenylation element binding proteins in development, health, and disease. Annu Rev Cell Dev Biol 30: 393–415. doi: 10.1146/annurev-cellbio-101011-155831
![]() |
[56] |
Huang YS, Jung MY, Sarkissian M, et al. (2002) N-methyl-D-aspartate receptor signaling results in Aurora kinase-catalyzed CPEB phosphorylation and alpha CaMKII mRNA polyadenylation at synapses. EMBO J 21: 2139–2148. doi: 10.1093/emboj/21.9.2139
![]() |
[57] |
Wang CF, Huang YS (2012) Calpain 2 activated through N-methyl-D-aspartic acid receptor signaling cleaves CPEB3 and abrogates CPEB3-repressed translation in neurons. Mol Cell Biol 32: 3321–3332. doi: 10.1128/MCB.00296-12
![]() |
[58] |
Siomi H, Siomi MC, Nussbaum RL, et al. (1993) The protein product of the fragile X gene, FMR1, has characteristics of an RNA-binding protein. Cell 74: 291–298. doi: 10.1016/0092-8674(93)90420-U
![]() |
[59] |
Verkerk AJ, Pieretti M, Sutcliffe JS, et al. (1991) Identification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndrome. Cell 65: 905–914. doi: 10.1016/0092-8674(91)90397-H
![]() |
[60] | Tsuboi D, Kuroda K, Tanaka M, et al. (2015) Disrupted-in-schizophrenia 1 regulates transport of ITPR1 mRNA for synaptic plasticity. Nat Neurosc 18: 698–707. |
[61] | Cohen TJ, Lee VM, Trojanowski JQ (2011) TDP-43 functions and pathogenic mechanisms implicated in TDP-43 proteinopathies. Trends Mol Med 17: 659–667. |
[62] |
Koyama A, Sugai A, Kato T, et al. (2016) Increased cytoplasmic TARDBP mRNA in affected spinal motor neurons in ALS caused by abnormal autoregulation of TDP-43. Nucleic Acids Res 44: 5820–5836. doi: 10.1093/nar/gkw499
![]() |
[63] |
Udagawa T, Farny NG, Jakovcevski M, et al. (2013) Genetic and acute CPEB1 depletion ameliorate fragile X pathophysiology. Nat Med 19: 1473–1477. doi: 10.1038/nm.3353
![]() |
[64] |
Iacoangeli A, Tiedge H (2013) Translational control at the synapse: role of RNA regulators. Trends Biochem Sci 38: 47–55. doi: 10.1016/j.tibs.2012.11.001
![]() |
[65] |
Santini E, Huynh TN, Klann E (2014) Mechanisms of translation control underlying long-lasting synaptic plasticity and the consolidation of long-term memory. Prog Mol Biol Transl Sci 122: 131–167. doi: 10.1016/B978-0-12-420170-5.00005-2
![]() |
[66] |
Sonenberg N, Hinnebusch AG (2009) Regulation of translation initiation in eukaryotes: mechanisms and biological targets. Cell 136: 731–745. doi: 10.1016/j.cell.2009.01.042
![]() |
[67] |
Thoreen CC (2013) Many roads from mTOR to eIF4F. Biochem Soc Trans 41: 913–916. doi: 10.1042/BST20130082
![]() |
[68] |
Pyronnet S (2000) Phosphorylation of the capbinding protein eIF4E by the MAPK-activated protein kinase Mnk1. Biochem Pharmacol 60: 1237–1243. doi: 10.1016/S0006-2952(00)00429-9
![]() |
[69] |
Panja D, Dagyte G, Bidinosti M, et al. (2009) Novel translational control in Arc-dependent long term potentiation consolidation in vivo. J Biol Chem 284: 31498–31511. doi: 10.1074/jbc.M109.056077
![]() |
[70] |
Tang SJ, Reis G, Kang H, et al. (2002) A rapamycin-sensitive signaling pathway contributes to long-term synaptic plasticity in the hippocampus. Proc Natl Acad Sci USA 99: 467–472. doi: 10.1073/pnas.012605299
![]() |
[71] |
Vilchez D, Saez I, Dillin A (2014) The role of protein clearance mechanisms in organismal ageing and age-related diseases. Nat Commun 5: 5659. doi: 10.1038/ncomms6659
![]() |
[72] |
Yi JJ, Ehlers MD (2005) Ubiquitin and protein turnover in synapse function. Neuron 47: 629–632. doi: 10.1016/j.neuron.2005.07.008
![]() |
[73] | Hamilton AM, Zito K (2013) Breaking it down: the ubiquitin proteasome system in neuronal morphogenesis. Neural Plast 2013: 196848. |
[74] | Bingol B, Schuman EM (2005) Synaptic protein degradation by the ubiquitin proteasome system. Curr Opin Neurobiol 15: 536–541. |
[75] |
Ravid T, Hochstrasser M (2008) Diversity of degradation signals in the ubiquitin-proteasome system. Nat Rev Mol Cell Biol 9: 679–690. doi: 10.1038/nrm2468
![]() |
[76] |
Hegde AN (2010) The ubiquitin-proteasome pathway and synaptic plasticity. Learn Mem 17: 314–327. doi: 10.1101/lm.1504010
![]() |
[77] |
Bingol B, Sheng M (2011) Deconstruction for reconstruction: the role of proteolysis in neural plasticity and disease. Neuron 69: 22–32. doi: 10.1016/j.neuron.2010.11.006
![]() |
[78] |
Bingol B, Schuman EM (2006) Activity-dependent dynamics and sequestration of proteasomes in dendritic spines. Nature 441: 1144–1148. doi: 10.1038/nature04769
![]() |
[79] | Hegde AN (2016) Proteolysis, synaptic plasticity and memory. Neurobiol Learn Mem S1074-7427: 30178–30172. |
[80] |
Li Q, Korte M, Sajikumar S (2016) Ubiquitin-proteasome system inhibition promotes long-term depression and synaptic tagging/capture. Cereb Cortex 26: 2541–2548. doi: 10.1093/cercor/bhv084
![]() |
[81] | Ciechanover A, Kwon YT (2015) Degradation of misfolded proteins in neurodegenerative diseases: therapeutic targets and strategies. ExpMol Med 47: e147. |
[82] |
Tarpey PS, Raymond FL, O'Meara S, et al. (2007) Mutations in CUL4B, which encodes a ubiquitin E3 ligase subunit, cause an X-linked mental retardation syndrome associated with aggressive outbursts, seizures, relative macrocephaly, central obesity, hypogonadism, pescavus, and tremor. Am J Hum Genet 80: 345–352. doi: 10.1086/511134
![]() |
[83] |
Dong C, Bach SV, Haynes KA, et al. (2014) Proteasome modulates positive and negative translational regulators in long-term synaptic plasticity. J Neurosci 34: 3171–3182. doi: 10.1523/JNEUROSCI.3291-13.2014
![]() |
[84] |
Johnson CW, Melia TJ, Yamamoto A (2012) Modulating macroautophagy: a neuronal perspective. Future Med Chem 4: 1715–1731. doi: 10.4155/fmc.12.112
![]() |
[85] | Komatsu M, Waguri S, Chiba T, et al. (2006) Loss of autophagy in the central nervous system causes neurodegeneration in mice. Nature 2006 441: 880–884. |
[86] |
Mizushima N, Komatsu M (2011) Autophagy: renovation of cells and tissues. Cell 147: 728–741. doi: 10.1016/j.cell.2011.10.026
![]() |
[87] |
Hu Z, Yang B, Mo X, et al. (2015) Mechanism and regulation of autophagy and its role in neuronal diseases. Mol Neurobiol 52: 1190–1209. doi: 10.1007/s12035-014-8921-4
![]() |
[88] |
Tang G, Gudsnuk K, Kuo SH, et al. (2014) Loss of mTOR-dependent macroautophagy causes autistic-like synaptic pruning deficits. Neuron 83: 1131–1143. doi: 10.1016/j.neuron.2014.07.040
![]() |
[89] |
Penzes P, Cahill ME, Jones KA, et al. (2011) Dendritic spine pathology in neuropsychiatric disorders. Nat Neurosci 14: 285–293. doi: 10.1038/nn.2741
![]() |
[90] |
Riccomagno MM, Kolodkin AL (2015) Sculpting neural circuits by axon and dendrite pruning. Annu Rev Cell Dev Biol 31: 779–805. doi: 10.1146/annurev-cellbio-100913-013038
![]() |
[91] |
Jung CH, Ro SH, Cao J, et al. (2010) mTOR regulation of autophagy. FEBS Lett 584: 1287–1295. doi: 10.1016/j.febslet.2010.01.017
![]() |
[92] |
Lipton JO, Sahin M (2014) The neurology of mTOR. Neuron 84: 275–291. doi: 10.1016/j.neuron.2014.09.034
![]() |
[93] | Roohi A, Hojjat-Farsangi M (2016) Recent Advances in targeting mTORsignaling pathway using small molecule inhibitors. J Drug Target 15: 1–37. |
[94] |
Jacinto E, Loewith R, Schmidt A, et al. (2004) Mammalian TOR complex 2 controls the actin cytoskeleton and is rapamycin insensitive. Nat Cell Biol 6: 1122–1128. doi: 10.1038/ncb1183
![]() |
[95] |
Gaubitz C, Prouteau M, Kusmider B, et al. (2016) TORC2 structure and function. Trends Biochem Sci 41: 532–545. doi: 10.1016/j.tibs.2016.04.001
![]() |
[96] |
Huang W, Zhu PJ, Zhang S, et al. (2013) mTORC2 controls actin polymerization required for consolidation of long-term memory. Nat Neurosci 16: 441–448. doi: 10.1038/nn.3351
![]() |
[97] |
Johnson JL, Huang W, Roman G, et al. (2015) TORC2: a novel target for treating age-associated memory impairment. Sci Rep 5: 15193. doi: 10.1038/srep15193
![]() |
[98] |
Lenz G, Avruch J (2005) Glutamatergic regulation of the p70S6 kinase in primary mouse neurons. J Biol Chem 280: 38121–38124. doi: 10.1074/jbc.C500363200
![]() |
[99] |
Takei N, Inamura N, Kawamura M, et al. (2004) Brain-derived neurotrophic factor induces mammalian target of rapamycin-dependent local activation of translation machinery and protein synthesis in neuronal dendrites. J Neurosci 24: 9760–9769. doi: 10.1523/JNEUROSCI.1427-04.2004
![]() |
[100] |
Lee CC, Huang CC, Wu MY, et al. (2005) Insulin stimulates postsynaptic density-95 protein translation via the phosphoinositide 3-kinase-Akt-mammalian target of rapamycin signaling pathway. J Biol Chem 280: 18543–18550. doi: 10.1074/jbc.M414112200
![]() |
[101] |
Costa-Mattioli M, Monteggia LM (2013) mTOR complexes in neurodevelopmental and neuropsychiatric disorders. Nat Neurosci 16: 1537–1543. doi: 10.1038/nn.3546
![]() |
[102] |
Sosanya NM, Cacheaux LP, Workman ER, et al. (2015) Mammalian target of rapamycin (mTOR) tagging promotes dendritic branch variability through the capture of Ca2+/calmodulin-dependent protein kinase II α (CaMKIIα) mRNAs by the RNA-binding protein HuD. J Biol Chem 290: 16357–16371. doi: 10.1074/jbc.M114.599399
![]() |
[103] |
Meyuhas O, Kahan T (2015) The race to decipher the top secrets of TOP mRNAs. Biochim Biophys Acta 1849: 801–811. doi: 10.1016/j.bbagrm.2014.08.015
![]() |
[104] | Ehninger D, Han S, Shilyansky C, et al. (2008) Reversal of learning deficits in a Tsc2+/– mouse model of tuberous sclerosis. Nat Med 14: 843–848. |
[105] |
Kwon CH, Luikart BW, Powell CM, et al. (2006) Pten regulates neuronal arborization and social interaction in mice. Neuron 50: 377–388. doi: 10.1016/j.neuron.2006.03.023
![]() |
[106] |
Hoeffer CA, Sanchez E, Hagerman RJ, et al. (2012) Altered mTOR signaling and enhanced CYFIP2 expression levels in subjects with fragile X syndrome. Genes Brain Behav 11: 332–341. doi: 10.1111/j.1601-183X.2012.00768.x
![]() |
[107] | Sharma A, Hoeffer CA, Takayasu Y, et al. (2010) Deregulation of mTOR signaling in fragile X syndrome. J Neurosci 30: 694–702. |
[108] |
Ricciardi S, Boggio EM, Grosso S, et al. (2011) Reduced AKT/mTOR signaling and protein synthesis deregulation in a Rett syndrome animal model. Hum Mol Genet 20: 1182–1196. doi: 10.1093/hmg/ddq563
![]() |
[109] |
Ramocki MB, Tavyev YJ, Peters SU (2010) The MECP2 duplication syndrome. Am J Med Genet A 152A: 1079–1088. doi: 10.1002/ajmg.a.33184
![]() |
[110] |
Sun J, Liu Y, Moreno S, et al. (2015) Imbalanced mechanistic target of rapamycin C1 and C2 activity in the cerebellum of Angelman syndrome mice impairs motor function. J Neurosci 35: 4706–4718. doi: 10.1523/JNEUROSCI.4276-14.2015
![]() |
[111] |
Stornetta RL, Zhu JJ (2011) Ras and Rap signaling in synaptic plasticity and mental disorders. Neuroscientist 17: 54–78. doi: 10.1177/1073858410365562
![]() |
[112] |
Phillips M, Pozzo-Miller L (2015) Dendritic spine dysgenesis in autism related disorders. Neurosci Lett 601: 30–40. doi: 10.1016/j.neulet.2015.01.011
![]() |
[113] | Huber KM, Klann E, Costa-Mattioli M, et al. (2015) Deregulation of mammalian target of rapamycin signaling in mouse models of autism. J Neurosci 35: 13836–13842. |
[114] |
Kelleher RJ III, Bear MF (2008) The autistic neuron: troubled translation? Cell 135: 401–406. doi: 10.1016/j.cell.2008.10.017
![]() |
[115] |
Zhou J, Blundell J, Ogawa S, et al. (2009) Pharmacological inhibition of mTORC1 suppresses anatomical, cellular, and behavioral abnormalities in neural-specific Pten knock-out mice. J Neurosci 29: 1773–1783. doi: 10.1523/JNEUROSCI.5685-08.2009
![]() |
[116] |
Busquets-Garcia A, Gomis-González M, Guegan T, et al. (2013) Targeting the endocannabinoid system in the treatment of fragile X syndrome. Nat Med 19: 603–607. doi: 10.1038/nm.3127
![]() |
[117] |
Sun J, Liu Y, Tran J, et al. (2016) mTORC1-S6K1 inhibition or mTORC2 activation improves hippocampal synaptic plasticity and learning in Angelman syndrome mice. Cell Mol Life Sci 73: 4303–4314. doi: 10.1007/s00018-016-2269-z
![]() |
[118] |
van Slegtenhorst M, de Hoogt R, Hermans C, et al. (1997) Identification of the tuberous sclerosis gene TSC1 on chromosome 9q34. Science 277: 805–808. doi: 10.1126/science.277.5327.805
![]() |
[119] | European Chromosome 16 Tuberous Sclerosis Consortium (1993) Identification andcharacterization of the tuberous sclerosis gene on chromosome 16. Cell 75: 1305–1315. |
[120] | Kwiatkowski DJ, Manning BD (2005) Tuberous sclerosis: a GAP at the crossroads of multiple signaling pathways. Hum Mol Genet 14 Spec No. 2: R251–R258. |
[121] |
Hwang SK, Lee JH, Yang JE, et al. (2016) Everolimus improves neuropsychiatric symptoms in a patient with tuberous sclerosis carrying a novel TSC2 mutation. Mol Brain 9: 56. doi: 10.1186/s13041-016-0222-6
![]() |
[122] |
Meikle L, Pollizzi K, Egnor A, et al. (2008) Response of a neuronal model of tuberous sclerosis to mammalian target of rapamycin (mTOR) inhibitors: effects on mTORC1 and Akt signaling lead to improved survival and function. J Neurosci 28: 5422–5432. doi: 10.1523/JNEUROSCI.0955-08.2008
![]() |
[123] | Sato A, Kasai S, Kobayashi T, et al. (2012) Rapamycin reverses impaired social interaction in mouse models of tuberous sclerosis complex. Nat Commun 3: 1292. |
[124] |
Williams VC, Lucas J, Babcock MA, et al., (2009) Neurofibromatosis type 1 revisited. Pediatrics 123: 124–133. doi: 10.1542/peds.2007-3204
![]() |
[125] | Garg S, Plasschaert E, Descheemaeker MJ, et al. (2015) Autism spectrum disorder profile in neurofibromatosis type I. J Autism Dev Disord 45: 1649–1657. |
[126] | Plasschaert E, Descheemaeker MJ, Van Eylen L, et al. (2015) Prevalence of autism spectrum disorder symptoms in children with neurofibromatosis type 1. Am J Med Genet B Neuropsychiatr Genet 168B: 72–80. |
[127] | Basu TN, Gutmann DH, Fletcher JA, et al. (1992) Aberrant regulation of ras proteins in malignant tumour cells from type 1 neurofibromatosis patients. Nature 356: 713–715. |
[128] |
Guilding C, McNair K, Stone TW, et al. (2007) Restored plasticity in a mouse model of neurofibromatosis type 1 via inhibition of hyperactive ERK and CREB. Eur J Neurosci 25: 99–105. doi: 10.1111/j.1460-9568.2006.05238.x
![]() |
[129] |
Wang Y, Kim E, Wang X, et al. (2012) ERK inhibition rescues defects in fate specification of Nf1-deficient neural progenitors and brain abnormalities. Cell 150: 816–830. doi: 10.1016/j.cell.2012.06.034
![]() |
[130] | Acosta MT, Kardel PG, Walsh KS, et al. (2011) Lovastatin as treatment for neurocognitive deficits in neurofibromatosis type 1: phase I study. PediatrNeurol 45: 241–245. |
[131] |
Li W, Cui Y, Kushner SA, et al. (2005) The HMG-CoA reductase inhibitor lovastatin reverses the learning and attention deficits in a mouse model of neurofibromatosis type 1. Curr Biol 15: 1961–1967. doi: 10.1016/j.cub.2005.09.043
![]() |
[132] |
Osterweil EK, Chuang SC, Chubykin AA, et al. (2013) Lovastatin corrects excess protein synthesis and prevents epileptogenesis in a mouse model of fragile X syndrome. Neuron 77: 243–250. doi: 10.1016/j.neuron.2012.01.034
![]() |
[133] | Waite KA, Eng C (2002) Protean PTEN: form and function. Am J Hum Genet 70: 829–844. |
[134] |
Butler MG, Dasouki MJ, Zhou XP, et al. (2005) Subset of individuals with autism spectrum disorders and extreme macrocephaly associated with germline PTEN tumour suppressor gene mutations. J Med Genet 42: 318–321. doi: 10.1136/jmg.2004.024646
![]() |
[135] |
Goffin A, Hoefsloot LH, Bosgoed E, et al. (2001) PTEN mutation in a family with Cowden syndrome and autism. Am J Med Genet 105: 521–524. doi: 10.1002/ajmg.1477
![]() |
[136] | Maehama T, Dixon JE (1998) The tumor suppressor, PTEN/MMAC1, dephosphorylates the lipid second messenger, phosphatidylinositol 3,4,5-trisphosphate. J Biol Chem 273: 13375–13378. |
[137] |
Penagarikano O, Mulle JG, Warren ST (2007) The pathophysiology of fragile X syndrome. Annu Rev Genomics Hum Genet 8: 109–129. doi: 10.1146/annurev.genom.8.080706.092249
![]() |
[138] | Brown V, Jin P, Ceman S, et al. (2001) Microarray identification of FMRP-associated brain mRNAs and altered mRNA translational profiles in fragile X syndrome. Cell 107: 477–487. |
[139] | Darnell JC, Van Driesche SJ, Zhang C, et al. (2011) FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism. Cell 146: 247–261. |
[140] |
Gross C, Nakamoto M, Yao X, et al. (2010) Excess phosphoinositide 3-kinase subunit synthesis and activity as a novel therapeutic target in fragile X syndrome. J Neurosci 30: 10624–10638. doi: 10.1523/JNEUROSCI.0402-10.2010
![]() |
[141] |
Gross C, Chang CW, Kelly SM, et al (2015) Increased expression of the PI3K enhancer PIKE mediates deficits in synaptic plasticity and behavior in fragile X syndrome. Cell Rep 11: 727–736. doi: 10.1016/j.celrep.2015.03.060
![]() |
[142] | Darnell JC, Klann E (2013) The translation of translational control by FMRP: therapeutic targets for FXS. Nat Neurosci 16: 1530–1536. |
[143] |
Richter JD, Bassell GJ, Klann E (2015) Deregulation and restoration of translational homeostasis in fragile X syndrome. Nat Rev Neurosci 16: 595–605. doi: 10.1038/nrn4001
![]() |
[144] |
Osterweil EK, Krueger DD, Reinhold K, et al. (2010) Hypersensitivity to mGluR5 and ERK1/2 leads to excessive protein synthesis in the hippocampus of a mouse model of fragile X syndrome. J Neurosci 30: 15616–15627. doi: 10.1523/JNEUROSCI.3888-10.2010
![]() |
[145] |
Tsai NP, Wilkerson JR, Guo W, et al. (2012) Multiple autism-linked genes mediate synapse elimination via proteasomal degradation of a synaptic scaffold PSD-95. Cell 151: 1581–1594. doi: 10.1016/j.cell.2012.11.040
![]() |
[146] |
Busquets-Garcia A, Maldonado R, Ozaita A (2014) New insights into the molecular pathophysiology of fragile X syndrome and therapeutic perspectives from the animal model. Int J Biochem Cell Biol 53: 121–126. doi: 10.1016/j.biocel.2014.05.004
![]() |
[147] | Berry-Kravis E, Des Portes V, Hagerman R, et al. (2016) Mavoglurant in fragile X syndrome: Results of two randomized, double-blind, placebo-controlled trials. Sci Transl Med 8: 321ra5. |
[148] |
Shepherd GM, Katz DM (2011) Synaptic microcircuit dysfunction in genetic models of neurodevelopmental disorders: focus on Mecp2 and Met. Curr Opin Neurobiol 21: 827–833. doi: 10.1016/j.conb.2011.06.006
![]() |
[149] |
Lombardi LM, Baker SA, Zoghbi HY (2015) MECP2 disorders: from the clinic to mice and back. J Clin Invest 125: 2914–2923. doi: 10.1172/JCI78167
![]() |
[150] |
Chahrour M, Jung SY, Shaw C, et al. (2008) MeCP2, a key contributor to neurological disease, activates and represses transcription. Science 320: 1224–1229. doi: 10.1126/science.1153252
![]() |
[151] |
Jiang M, Ash RT, Baker SA, et al. (2013) Dendritic arborization and spine dynamics are abnormal in the mouse model of MECP2 duplication syndrome. J Neurosci 33: 19518–19533. doi: 10.1523/JNEUROSCI.1745-13.2013
![]() |
[152] |
Buiting K, Williams C, Horsthemke B (2016) Angelman syndrome-insights into a rare neurogenetic disorder. Nat Rev Neurol 12: 584–593. doi: 10.1038/nrneurol.2016.133
![]() |
[153] |
Kishino T, Lalande M, Wagstaff J (1997) UBE3A/E6-AP mutations cause Angelman syndrome. Nat Genet 15: 70–73. doi: 10.1038/ng0197-70
![]() |
[154] |
Vu TH, Hoffman AR (1997) Imprinting of the Angelman syndrome gene, UBE3A, is restricted to brain. Nat Genet 17: 12–13. doi: 10.1038/ng0997-12
![]() |
[155] |
Reiter LT, Seagroves TN, Bowers M, et al. (2006) Expression of the Rho-GEF Pbl/ECT2 is regulated by the UBE3A E3 ubiquitin ligase. Hum Mol Genet 15: 2825–2835. doi: 10.1093/hmg/ddl225
![]() |
[156] |
Jiang YH, Armstrong D, Albrecht U, et al. (1998) Mutation of the Angelman ubiquitin ligase in mice causes increased cytoplasmic p53 and deficits of contextual learning and long-term potentiation. Neuron 21: 799–811. doi: 10.1016/S0896-6273(00)80596-6
![]() |
[157] |
Mishra A, Godavarthi SK, Jana NR (2009) UBE3A/E6-AP regulates cell proliferation by promoting proteasomal degradation of p27. Neurobiol Dis 36: 26–34. doi: 10.1016/j.nbd.2009.06.010
![]() |
[158] |
Kumar S, Talis AL, Howley PM (1999) Identification of HHR23A as a substrate for E6-associated protein-mediated ubiquitination. J Biol Chem 274: 18785–18792. doi: 10.1074/jbc.274.26.18785
![]() |
[159] |
Greer PL, Hanayama R, Bloodgood BL, et al. (2010) The Angelman Syndrome protein Ube3A regulates synapse development by ubiquitinating arc. Cell 140: 704–716. doi: 10.1016/j.cell.2010.01.026
![]() |
[160] |
Margolis SS, Salogiannis J, Lipton DM, et al. (2010) EphB-mediated degradation of the RhoA GEF Ephexin5 relieves a developmental brake on excitatory synapse formation. Cell 143: 442–455. doi: 10.1016/j.cell.2010.09.038
![]() |
[161] |
Jay V, Becker LE, Chan FW, et al. (1991) Puppet-like syndrome of Angelman: a pathologic and neurochemical study. Neurology 41: 416–422. doi: 10.1212/WNL.41.3.416
![]() |
[162] |
Hethorn WR, Ciarlone SL, Filonova I, et al. (2015) Reelin supplementation recovers synaptic plasticity and cognitive deficits in a mouse model for Angelman syndrome. Eur J Neurosci 41: 1372–1380. doi: 10.1111/ejn.12893
![]() |
[163] |
Krishnan A, Zhang R, Yao V, et al. (2016) Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder. Nat Neurosci 19: 1454–1462. doi: 10.1038/nn.4353
![]() |
[164] |
Kilpinen H, Ylisaukko-Oja T, Hennah W, et al. (2008) Association of DISC1 with autism and Asperger syndrome. Mol Psychiatry 13: 187–196. doi: 10.1038/sj.mp.4002031
![]() |
[165] |
Thomson PA, Parla JS, McRae AF, et al. (2014) 708 Common and 2010 rare DISC1 locus variants identified in 1542 subjects: analysis for association with psychiatric disorder and cognitive traits. Mol Psychiatry 19: 668–675. doi: 10.1038/mp.2013.68
![]() |
[166] |
Iossifov I, O'Roak BJ, Sanders SJ, et al. (2014) The contribution of de novo coding mutations to autism spectrum disorder. Nature 515: 216–221. doi: 10.1038/nature13908
![]() |
[167] |
Krumm N, Turner TN, Baker C, et al. (2015) Excess of rare, inherited truncating mutations in autism. Nat Genet 47: 582–588. doi: 10.1038/ng.3303
![]() |
[168] |
Brett M, McPherson J, Zang ZJ, et al. (2014) Massively parallel sequencing of patients with intellectual disability, congenital anomalies and/or autism spectrum disorders with a targeted gene panel. PLoS One 9: e93409. doi: 10.1371/journal.pone.0093409
![]() |
[169] |
Grønskov K, Brøndum-Nielsen K, Dedic A, et al. (2011) A nonsense mutation in FMR1 causing fragile X syndrome. Eur J Hum Genet 19: 489–491. doi: 10.1038/ejhg.2010.223
![]() |
[170] | Vincent JB, Konecki DS, Munstermann E, et al. (1996) Point mutation analysis of the FMR1 gene in autism. Mol Psychiatry 1: 227–231. |
[171] |
Girirajan S, Dennis MY, Baker C, et al. (2013) Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder. Am J Hum Genet 92: 221–237. doi: 10.1016/j.ajhg.2012.12.016
![]() |
[172] |
Sebat J, Lakshmi B, Malhotra D, et al. (2007) Strong association of de novo copy number mutations with autism. Science 316: 445–449. doi: 10.1126/science.1138659
![]() |
[173] |
Zhao WW (2013) Intragenic deletion of RBFOX1 associated with neurodevelopmental/neuropsychiatric disorders and possibly other clinical presentations. Mol Cytogenet 6: 26. doi: 10.1186/1755-8166-6-26
![]() |
[174] |
Nguyen LS, Kim HG, Rosenfeld JA, et al. (2013) Contribution of copy number variants involving nonsense-mediated mRNA decay pathway genes to neuro-developmental disorders. Hum Mol Genet 22: 1816–1825. doi: 10.1093/hmg/ddt035
![]() |
[175] |
Talkowski ME, Rosenfeld JA, Blumenthal I, et al. (2012) Sequencing chromosomal abnormalities reveals neurodevelopmental loci that confer risk across diagnostic boundaries. Cell 149: 525–537. doi: 10.1016/j.cell.2012.03.028
![]() |
[176] |
Turner TN, Hormozdiari F, Duyzend MH, et al. (2016) Genome Sequencing of Autism-Affected Families Reveals Disruption of Putative Noncoding Regulatory DNA. Am J Hum Genet 98: 58–74. doi: 10.1016/j.ajhg.2015.11.023
![]() |
[177] |
Amir RE, Van den Veyver IB, Wan M, et al. (1999) Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2. Nat Genet 23: 185–188. doi: 10.1038/13810
![]() |
[178] | Hanchard NA, Carvalho CM, Bader P, et al. (2012) A partial MECP2 duplication in a mildly affected adult male: a putative role for the 3' untranslated region in the MECP2 duplication phenotype. BMC Med Genet 13: 71. |
[179] |
Shibayama A, Cook EH Jr, Feng J, et al. (2004) MECP2 structural and 3'-UTR variants in schizophrenia, autism and other psychiatric diseases: a possible association with autism. Am J Med Genet B Neuropsychiatr Genet 128B: 50–53. doi: 10.1002/ajmg.b.30016
![]() |
[180] |
Helander A, Stödberg T, Jaeken J, et al. (2013) Dolichol kinase deficiency (DOLK-CDG) with a purely neurological presentation caused by a novel mutation. Mol Genet Metab 110: 342–344. doi: 10.1016/j.ymgme.2013.07.002
![]() |
[181] |
Epi4K Consortium, Epilepsy Phenome/Genome Project, Allen AS, et al. (2013) De novo mutations in epileptic encephalopathies. Nature 501: 217–221. doi: 10.1038/nature12439
![]() |
[182] |
McBride KL, Varga EA, Pastore MT, et al. (2010) Confirmation study of PTEN mutations among individuals with autism or developmental delays/mental retardation and macrocephaly. Autism Res 3: 137–141. doi: 10.1002/aur.132
![]() |
[183] |
Marui T, Hashimoto O, Nanba E, et al. (2004) Association between the neurofibromatosis-1 (NF1) locus and autism in the Japanese population. Am J Med Genet B Neuropsychiatr Genet 131B: 43–47. doi: 10.1002/ajmg.b.20119
![]() |
[184] |
Smalley SL (1998) Autism and tuberous sclerosis. J Autism Dev Disord 28: 407–414. doi: 10.1023/A:1026052421693
![]() |
[185] |
Serajee FJ, Nabi R, Zhong H, et al. (2003) Association of INPP1, PIK3CG, and TSC2 gene variants with autistic disorder: implications for phosphatidylinositol signalling in autism. J Med Genet 40: e119. doi: 10.1136/jmg.40.11.e119
![]() |
[186] |
Kong A, Frigge ML, Masson G, et al. (2012) Rate of de novo mutations and the importance of father's age to disease risk. Nature 488: 471–475. doi: 10.1038/nature11396
![]() |
[187] |
O'Roak BJ, Vives L, Girirajan S, et al. (2012) Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations. Nature 485: 246–250. doi: 10.1038/nature10989
![]() |
[188] |
Harlalka GV, Baple EL, Cross H, et al. (2013) Mutation of HERC2 causes developmental delay with Angelman-like features. J Med Genet 50: 65–73. doi: 10.1136/jmedgenet-2012-101367
![]() |
[189] |
Puffenberger EG, Jinks RN, Wang H, et al. (2012) A homozygous missense mutation in HERC2 associated with global developmental delay and autism spectrum disorder. Hum Mutat 33: 1639–1646. doi: 10.1002/humu.22237
![]() |
[190] | Deciphering Developmental Disorders Study (2015) Large-scale discovery of novel genetic causes of developmental disorders. Nature 519: 223–228. |
[191] |
Nava C, Lamari F, Héron D, et al. (2012) Analysis of the chromosome X exome in patients with autism spectrum disorders identified novel candidate genes, including TMLHE. Transl Psychiatry 2: e179. doi: 10.1038/tp.2012.102
![]() |
[192] |
Tastet J, Decalonne L, Marouillat S, et al. (2015) Mutation screening of the ubiquitin ligase gene RNF135 in French patients with autism. Psychiatr Genet 25: 263–267. doi: 10.1097/YPG.0000000000000100
![]() |
[193] |
Vourc'h P, Martin I, Bonnet-Brilhault F, et al. (2003) Mutation screening and association study of the UBE2H gene on chromosome 7q32 in autistic disorder. Psychiatr Genet 13: 221–225. doi: 10.1097/00041444-200312000-00005
![]() |
[194] | Noor A, Dupuis L, Mittal K, et al. (2015) 15q11.2 duplication encompassing only the UBE3A gene is associated with developmental delay and neuropsychiatric phenotypes. HumMutat 36: 689–693. |
[195] |
Nurmi EL, Bradford Y, Chen Y, et al. (2001) Linkage disequilibrium at the Angelman syndrome gene UBE3A in autism families. Genomics 77: 105–113. doi: 10.1006/geno.2001.6617
![]() |
[196] |
Chahrour MH, Yu TW, Lim ET, et al. (2012) Whole-exome sequencing and homozygosity analysis implicate depolarization-regulated neuronal genes in autism. PLoS Genet 8: e1002635. doi: 10.1371/journal.pgen.1002635
![]() |
[197] |
Flex E, Ciolfi A, Caputo V, et al. (2013) Loss of function of the E3 ubiquitin-protein ligase UBE3B causes Kaufman oculocerebrofacial syndrome. J Med Genet 50: 493–499. doi: 10.1136/jmedgenet-2012-101405
![]() |
[198] |
Salyakina D, Cukier HN, Lee JM, et al. (2011) Copy number variants in extended autism spectrum disorder families reveal candidates potentially involved in autism risk. PLoS One 6: e26049. doi: 10.1371/journal.pone.0026049
![]() |
[199] | Kato T, Tamiya G, Koyama S, et al. (2012) UBR5 gene mutation is associated with familial adult myoclonic epilepsy in a Japanese family. ISRN Neurol 2012: 508308. |
[200] |
Najmabadi H, Hu H, Garshasbi M, et al. (2011) Deep sequencing reveals 50 novel genes for recessive cognitive disorders. Nature 478: 57–63. doi: 10.1038/nature10423
![]() |
[201] |
Hao YH, Fountain MD Jr, FonTacer K, et al. (2015) USP7 acts as a molecular rheostat to promote WASH-dependent endosomal protein recycling and is mutated in a human neurodevelopmental disorder. Mol Cell 59: 956–969. doi: 10.1016/j.molcel.2015.07.033
![]() |
[202] | Wang K, Zhang H, Ma D, et al. (2009) Common genetic variants on 5p14.1 associate with autism spectrum disorders. Nature 459: 528–533. |
[203] |
Piton A, Gauthier J, Hamdan FF, et al. (2011) Systematic resequencing of X-chromosome synaptic genes in autism spectrum disorder and schizophrenia. Mol Psychiatry 16: 867–880. doi: 10.1038/mp.2010.54
![]() |
[204] |
De Rubeis S, He X, Goldberg AP, et al. (2014) Synaptic, transcriptional and chromatin genes disrupted in autism. Nature 515: 209–215. doi: 10.1038/nature13772
![]() |
[205] |
Sanders SJ, He X, Willsey AJ, et al. (2015) Insights into autism spectrum disorder genomic architecture and biology from 71 Risk Loci. Neuron 87: 1215–1233. doi: 10.1016/j.neuron.2015.09.016
![]() |
[206] |
Lim ET, Raychaudhuri S, Sanders SJ, et al. (2013) Rare complete knockouts in humans: population distribution and significant role in autism spectrum disorders. Neuron 77: 235–242. doi: 10.1016/j.neuron.2012.12.029
![]() |
[207] |
Liao C, Fu F, Li R, et al. (2013) Loss-of-function variation in the DPP6 gene is associated with autosomal dominant microcephaly and mental retardation. Eur J Med Genet 56: 484–489. doi: 10.1016/j.ejmg.2013.06.008
![]() |
[208] |
Marshall CR, Noor A, Vincent JB, et al. (2008) Structural variation of chromosomes in autism spectrum disorder. Am J Hum Genet 82: 477–488. doi: 10.1016/j.ajhg.2007.12.009
![]() |
[209] |
Prontera P, Napolioni V, Ottaviani V, et al. (2014) DPP6 gene disruption in a family with Gilles de la Tourette syndrome. Neurogenetics 15: 237–242. doi: 10.1007/s10048-014-0418-9
![]() |
[210] |
Zhang Y, Manning BD (2015) mTORC1 signaling activates NRF1 to increase cellular proteasome levels. Cell Cycle 14: 2011–2017. doi: 10.1080/15384101.2015.1044188
![]() |
[211] |
Wang X, Proud CG (2006) The mTOR pathway in the control of protein synthesis. Physiology 21: 362–369. doi: 10.1152/physiol.00024.2006
![]() |
[212] |
Tilot AK, Frazier TW 2nd, Eng C (2015) Balancing proliferation and connectivity in PTEN-associated autism spectrum disorder. Neurotherapeutics 12: 609–619. doi: 10.1007/s13311-015-0356-8
![]() |
[213] |
Sharma A, Hoeffer CA, Takayasu Y, et al. (2010) Dysregulation of mTOR signaling in fragile X syndrome. J Neurosci 30: 694–702. doi: 10.1523/JNEUROSCI.3696-09.2010
![]() |
[214] |
Busquets-Garcia A, Gomis-González M, Guegan T, et al. (2013) Targeting the endocannabinoid system in the treatment of fragile X syndrome. Nat Med 19: 603–607. doi: 10.1038/nm.3127
![]() |
1. | Aarti Sharma, Sidharth Mehan, Targeting PI3K-AKT/mTOR signaling in the prevention of autism, 2021, 147, 01970186, 105067, 10.1016/j.neuint.2021.105067 |
Gene | Disorders | Function | Reference |
CELF1/CUG-BP1 | Myotonic dystrophy, type 1 | RNA binding protein | [163] |
DISC1 | ASD/Asperger syndrome, Schizophrenia (SCZ) | Multifunctional interacting protein | [164,165] |
ELAVL3 | ASD | RNA binding protein | [166,167] |
FMR1 | ASD, Attention Deficit Hyperactivity Disorder (ADHD), Developmental Delay (DD), Epilepsy (EP) Intellectual Disability (ID) | RNA binding protein | [168,169,170] |
RBFOX1 | ASD, DD, EP, ID | RNA binding protein | [171,172,173] |
RNPS1 | ASD, DD, ID | RNA binding protein | [174] |
SNRPN | ASD | Tissue-specific alternative RNA processing | [175,176] |
MECP2 | ASD, ADHD, DD, EP, ID, SCZ | Methylation-dependent transcriptional repression activity, RNA processing | [177,178,179] |
DOLK | ASD, EP, ID | Dolichol kinase, glycosylation | [180] |
PTEN | ASD, ADHD, DD, EP, ID | Phosphatase: mTOR negative regulator via PI3K | [181,135,182] |
NF1 | ASD | Ras GTPase: Ras-MAPK negative regulator | [183,126] |
TSC1 | ASD, DD, ID | GTPase activator protein: mTOR negative regulator via Rheb | [168,184] |
TSC2 | ASD, DD, EP, ID | GTPase activator protein: mTOR negative regulator via Rheb | [121,184,185] |
CUL3 | ASD, SCZ | E3-ubiquitin ligase | [186,187] |
CUL7 | ASD | E3-ubiquitin ligase | [166,167] |
HECW2 | ASD | E3-ubiquitin ligase | [166,167] |
HERC2 | ASD, DD, ID | E3-ubiquitin ligase | [188,189] |
HUWE1 | ASD, DD, ID | E3-ubiquitin ligase | [190,191] |
RNF135 | ASD | E2-dependent E3-ubiquitin ligase | [192] |
UBE2H | ASD | Ubiquitin ligase | [193] |
UBE3A | ASD, DD, EP, ID | E3-ubiquitin ligase | [194,195] |
UBE3B | ASD, DD, ID | E3-ubiquitin ligase | [196,197] |
UBE3C | ASD | E3-ubiquitin ligase | [187] |
UBL7 | ASD, ID | Ubiquitin binding | [198] |
UBR5 | ASD, EP | E3-ubiquitin ligase | [199,167] |
UBR7 | ASD | E3-ubiquitin ligase | [200] |
USP7 | ASD, DD, ID | Deubiquitination | [201,166] |
USP9Y | ASD | Polyubiquitin hydrolase | [202] |
PSMD10 | ASD, SCZ | Non-ATPase proteasome subunit of the 19S regulator: protein degradation | [203] |
PYHIN1 | ASD | Transcriptional regulation | [204,167] |
CAPN12 | ASD | Calcium-regulated non-lysosomal thiol-protease | [166,205] |
DPP4 | ASD | Serine exopeptidase | [204,206] |
DPP6 | ASD, ADHD, ID, TS | Promotes cell surface expression of the KCND2 potassium channel | [207,208,209] |
DPP10 | ASD | Promotes cell surface expression of the KCND2 potassium channel | [171,208] |
Gene code and corresponding protein name, CELF1/CUG-BP1: CUG triple repeat RNA binding protein 1; DISC1: disrupted in schizophrenia 1 protein; ELAVL3: ELAV-like protein 3; FMR1: fragile X mental retardation protein; RBFOX1: RNA binding protein fox-1 homolog; RNPS1: RNA binding protein with serine-rich domain 1; SNRPN: small nuclear ribonucleoprotein polypeptide N; MECP2: methyl-CpG-binding protein 2; DOLK: dolichol kinase; PTEN: phosphatase and tensin homolog; NF1: neurofibromin; TSC1/2: tuberous sclerosis complex 1/2; CUL3: cullin-3; CUL7: cullin-7; HECW2: HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2; HERC2: HECT and RLD domain containing E3 ubiquitin protein ligase 2; HUWE1: HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase; RNF135: ring finger protein 135; UBE2H: ubiquitin conjugating enzyme E2 H; UBE3A: ubiquitin protein ligase E3A; UBE3B: ubiquitin protein ligase E3B;UBE3C: ubiquitin protein ligase E3C; UBL7: ubiquitin-like 7; UBR5: ubiquitin protein ligase E3 component N-recognin 5; UBR7: ubiquitin protein ligase E3 component N-recognin 7; USP7: ubiquitin specific peptidase 7; USP9Y: ubiquitin specific peptidase 9, Y-linked; PSMD10: proteasome 26S subunit, non-ATPase 10; PYHIN1: Pyrin and HIN domain family member 1; CAPN12: calpain 12; DPP4: dypeptidyl peptidase like 4; DPP6: dypeptidyl peptidase like 6; DPP10: dypeptidyl peptidase like 10. |
Disorder | Gene mutated | mTOR pathway activity | Sensitive to treatment | Reference |
Tuberous sclerosis | Tsc1 HZ in neurons | Enhanced (↑p-S6) | Rapamycin | [122] |
Tuberous sclerosis | Tsc2 HZ | Enhanced (↑p-S6K) | Rapamycin | [123] |
PTEN-related disorders | Pten in neurons | Enhanced (↑p-S6) | [105] | |
PTEN-related disorders | Pten in neurons | Enhanced (↑p-S6) | Rapamycin | [115] |
Fragile X syndrome | Fmr1 KO | Enhanced (↑p-mTOR, ↑p-S6K, ↑p-S6) | [213] | |
Fragile X syndrome | Fmr1 KO | Enhanced (↑p-S6K) | Temsirolimus | [214] |
Rett syndrome | Mecp2 KO | Reduced (↓p-mTOR, ↓p-S6K, ↓p-S6) | [108] | |
MECP2 duplication syndrome | Mecp2 duplication | Enhanced (↑p-S6K) | [151] | |
Angelman syndrome | Ube3a | Enhanced (↑p-mTOR, ↑p-S6K, ↑p-S6) | Rapamycin | [110,117] |
Gene | Disorders | Function | Reference |
CELF1/CUG-BP1 | Myotonic dystrophy, type 1 | RNA binding protein | [163] |
DISC1 | ASD/Asperger syndrome, Schizophrenia (SCZ) | Multifunctional interacting protein | [164,165] |
ELAVL3 | ASD | RNA binding protein | [166,167] |
FMR1 | ASD, Attention Deficit Hyperactivity Disorder (ADHD), Developmental Delay (DD), Epilepsy (EP) Intellectual Disability (ID) | RNA binding protein | [168,169,170] |
RBFOX1 | ASD, DD, EP, ID | RNA binding protein | [171,172,173] |
RNPS1 | ASD, DD, ID | RNA binding protein | [174] |
SNRPN | ASD | Tissue-specific alternative RNA processing | [175,176] |
MECP2 | ASD, ADHD, DD, EP, ID, SCZ | Methylation-dependent transcriptional repression activity, RNA processing | [177,178,179] |
DOLK | ASD, EP, ID | Dolichol kinase, glycosylation | [180] |
PTEN | ASD, ADHD, DD, EP, ID | Phosphatase: mTOR negative regulator via PI3K | [181,135,182] |
NF1 | ASD | Ras GTPase: Ras-MAPK negative regulator | [183,126] |
TSC1 | ASD, DD, ID | GTPase activator protein: mTOR negative regulator via Rheb | [168,184] |
TSC2 | ASD, DD, EP, ID | GTPase activator protein: mTOR negative regulator via Rheb | [121,184,185] |
CUL3 | ASD, SCZ | E3-ubiquitin ligase | [186,187] |
CUL7 | ASD | E3-ubiquitin ligase | [166,167] |
HECW2 | ASD | E3-ubiquitin ligase | [166,167] |
HERC2 | ASD, DD, ID | E3-ubiquitin ligase | [188,189] |
HUWE1 | ASD, DD, ID | E3-ubiquitin ligase | [190,191] |
RNF135 | ASD | E2-dependent E3-ubiquitin ligase | [192] |
UBE2H | ASD | Ubiquitin ligase | [193] |
UBE3A | ASD, DD, EP, ID | E3-ubiquitin ligase | [194,195] |
UBE3B | ASD, DD, ID | E3-ubiquitin ligase | [196,197] |
UBE3C | ASD | E3-ubiquitin ligase | [187] |
UBL7 | ASD, ID | Ubiquitin binding | [198] |
UBR5 | ASD, EP | E3-ubiquitin ligase | [199,167] |
UBR7 | ASD | E3-ubiquitin ligase | [200] |
USP7 | ASD, DD, ID | Deubiquitination | [201,166] |
USP9Y | ASD | Polyubiquitin hydrolase | [202] |
PSMD10 | ASD, SCZ | Non-ATPase proteasome subunit of the 19S regulator: protein degradation | [203] |
PYHIN1 | ASD | Transcriptional regulation | [204,167] |
CAPN12 | ASD | Calcium-regulated non-lysosomal thiol-protease | [166,205] |
DPP4 | ASD | Serine exopeptidase | [204,206] |
DPP6 | ASD, ADHD, ID, TS | Promotes cell surface expression of the KCND2 potassium channel | [207,208,209] |
DPP10 | ASD | Promotes cell surface expression of the KCND2 potassium channel | [171,208] |
Gene code and corresponding protein name, CELF1/CUG-BP1: CUG triple repeat RNA binding protein 1; DISC1: disrupted in schizophrenia 1 protein; ELAVL3: ELAV-like protein 3; FMR1: fragile X mental retardation protein; RBFOX1: RNA binding protein fox-1 homolog; RNPS1: RNA binding protein with serine-rich domain 1; SNRPN: small nuclear ribonucleoprotein polypeptide N; MECP2: methyl-CpG-binding protein 2; DOLK: dolichol kinase; PTEN: phosphatase and tensin homolog; NF1: neurofibromin; TSC1/2: tuberous sclerosis complex 1/2; CUL3: cullin-3; CUL7: cullin-7; HECW2: HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2; HERC2: HECT and RLD domain containing E3 ubiquitin protein ligase 2; HUWE1: HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase; RNF135: ring finger protein 135; UBE2H: ubiquitin conjugating enzyme E2 H; UBE3A: ubiquitin protein ligase E3A; UBE3B: ubiquitin protein ligase E3B;UBE3C: ubiquitin protein ligase E3C; UBL7: ubiquitin-like 7; UBR5: ubiquitin protein ligase E3 component N-recognin 5; UBR7: ubiquitin protein ligase E3 component N-recognin 7; USP7: ubiquitin specific peptidase 7; USP9Y: ubiquitin specific peptidase 9, Y-linked; PSMD10: proteasome 26S subunit, non-ATPase 10; PYHIN1: Pyrin and HIN domain family member 1; CAPN12: calpain 12; DPP4: dypeptidyl peptidase like 4; DPP6: dypeptidyl peptidase like 6; DPP10: dypeptidyl peptidase like 10. |
Disorder | Gene mutated | mTOR pathway activity | Sensitive to treatment | Reference |
Tuberous sclerosis | Tsc1 HZ in neurons | Enhanced (↑p-S6) | Rapamycin | [122] |
Tuberous sclerosis | Tsc2 HZ | Enhanced (↑p-S6K) | Rapamycin | [123] |
PTEN-related disorders | Pten in neurons | Enhanced (↑p-S6) | [105] | |
PTEN-related disorders | Pten in neurons | Enhanced (↑p-S6) | Rapamycin | [115] |
Fragile X syndrome | Fmr1 KO | Enhanced (↑p-mTOR, ↑p-S6K, ↑p-S6) | [213] | |
Fragile X syndrome | Fmr1 KO | Enhanced (↑p-S6K) | Temsirolimus | [214] |
Rett syndrome | Mecp2 KO | Reduced (↓p-mTOR, ↓p-S6K, ↓p-S6) | [108] | |
MECP2 duplication syndrome | Mecp2 duplication | Enhanced (↑p-S6K) | [151] | |
Angelman syndrome | Ube3a | Enhanced (↑p-mTOR, ↑p-S6K, ↑p-S6) | Rapamycin | [110,117] |