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Special Issue: Recent developments and applications in Computational Biophysics and Bioinformatics

Guest Editors

Prof. Lin Li
Computational Biophysics and Bioinformatics Lab, Department of Physics, University of Texas at El Paso, USA
Email: lli5@utep.edu


Prof. Shan Zhao
Department of Mathematics, University of Alabama, Tuscaloosa, AL, USA
Email: szhao@ua.edu


Manuscript Topics

Many approaches in Computational Biophysics and Bioinformatics have been developed and widely used to study important biology problems, such as biomolecule structure predictions, simulations of biomolecules, protein-protein/DNA/RNA interactions, disease related studies, etc. Many efforts have been made to develop and improve the Computational Biophysics and Bioinformatics approaches by implementing cutting edge techniques such as Deep Learning, Artificial Intelligence, Big Data, etc. To keep up with the progresses made in the area of Computational Biophysics and Bioinformatics, we organize this special issue about the Recent development and applications in Computational Biophysics and Bioinformatics. Research articles and high-quality review articles are welcome for this special issue. Potential topics include, but are not limited to:


• Human health related studies (research articles on COVID-19 are highly encouraged)
• Structure predictions of biomolecules
• Machine learning and data mining in Computational Biophysics and Bioinformatics
• Biomolecule-related software or database development
• Algorithms, analysis and validation for biomolecular data
• Protein-protein/DNA/RNA interactions
• Prediction of protein-ligand interaction energies
• Drug design


Instructions for authors
https://www.aimspress.com/mbe/news/solo-detail/instructionsforauthors
Please submit your manuscript to online submission system
https://aimspress.jams.pub/


Paper Submission

All manuscripts will be peer-reviewed before their acceptance for publication. The deadline for manuscript submission is 28 December 2021

Published Papers(9)

Research article
Establishment and analysis of the lncRNA-miRNA-mRNA network based on competitive endogenous RNA identifies functional genes in heart failure
Xudan Ma Qijun Zhang Haihong Zhu Kefeng Huang Weina Pang Qin Zhang
2021, Volume 18, Issue 4: 4011-4026. doi: 10.3934/mbe.2021201
Abstract HTML PDF Cited (12) Viewed (4860)
Research article
A model for predicting drug-disease associations based on dense convolutional attention network
Huiqing Wang Sen Zhao Jing Zhao Zhipeng Feng
2021, Volume 18, Issue 6: 7419-7439. doi: 10.3934/mbe.2021367
Abstract HTML PDF Cited (4) Viewed (4220)
Research article
An efficient and flexible multiplicity adjustment for chi-square endpoints
Amy Wagler Melinda McCann
2021, Volume 18, Issue 5: 4971-4986. doi: 10.3934/mbe.2021253
Abstract HTML PDF Viewed (3716)
Research article
Investigations into the role of non-bond interaction on gelation mechanism of silk fibroin hydrogel
Xuewei Jiang Lu Zheng Huhe Wu Jun Zhang
2021, Volume 18, Issue 4: 4071-4083. doi: 10.3934/mbe.2021204
Abstract HTML PDF Cited (5) Viewed (3968)
Research article
Electrostatic features for nucleocapsid proteins of SARS-CoV and SARS-CoV-2
Wenhan Guo Yixin Xie Alan E Lopez-Hernandez Shengjie Sun Lin Li
2021, Volume 18, Issue 3: 2372-2383. doi: 10.3934/mbe.2021120
Abstract HTML PDF Cited (14) Viewed (4714)
Research article
Influence of temperature-dependent acoustic and thermal parameters and nonlinear harmonics on the prediction of thermal lesion under HIFU ablation
Hu Dong Gang Liu Xin Tong
2021, Volume 18, Issue 2: 1340-1351. doi: 10.3934/mbe.2021070
Abstract HTML PDF Cited (4) Viewed (3723)
Research article
Insights into protease sequence similarities by comparing substrate sequences and phylogenetic dynamics
Enfeng Qi Can Fu Ying Zhai Jianghui Dong
2021, Volume 18, Issue 1: 837-850. doi: 10.3934/mbe.2021044
Abstract HTML PDF Viewed (3558)
Research article
Performance of protein-ligand docking with CDK4/6 inhibitors: a case study
Linlu Song Shangbo Ning Jinxuan Hou Yunjie Zhao
2021, Volume 18, Issue 1: 456-470. doi: 10.3934/mbe.2021025
Abstract HTML PDF Cited (2) Viewed (5659)
Research article
A Newton-like iterative method implemented in the DelPhi for solving the nonlinear Poisson-Boltzmann equation
Chuan Li Mark McGowan Emil Alexov Shan Zhao
2020, Volume 17, Issue 6: 6259-6277. doi: 10.3934/mbe.2020331
Abstract HTML PDF Viewed (5990)