Research article

SRV-GAN: A generative adversarial network for segmenting retinal vessels


  • Received: 18 March 2022 Revised: 23 June 2022 Accepted: 27 June 2022 Published: 12 July 2022
  • In the field of ophthalmology, retinal diseases are often accompanied by complications, and effective segmentation of retinal blood vessels is an important condition for judging retinal diseases. Therefore, this paper proposes a segmentation model for retinal blood vessel segmentation. Generative adversarial networks (GANs) have been used for image semantic segmentation and show good performance. So, this paper proposes an improved GAN. Based on R2U-Net, the generator adds an attention mechanism, channel and spatial attention, which can reduce the loss of information and extract more effective features. We use dense connection modules in the discriminator. The dense connection module has the characteristics of alleviating gradient disappearance and realizing feature reuse. After a certain amount of iterative training, the generated prediction map and label map can be distinguished. Based on the loss function in the traditional GAN, we introduce the mean squared error. By using this loss, we ensure that the synthetic images contain more realistic blood vessel structures. The values of area under the curve (AUC) in the retinal blood vessel pixel segmentation of the three public data sets DRIVE, CHASE-DB1 and STARE of the proposed method are 0.9869, 0.9894 and 0.9885, respectively. The indicators of this experiment have improved compared to previous methods.

    Citation: Chen Yue, Mingquan Ye, Peipei Wang, Daobin Huang, Xiaojie Lu. SRV-GAN: A generative adversarial network for segmenting retinal vessels[J]. Mathematical Biosciences and Engineering, 2022, 19(10): 9948-9965. doi: 10.3934/mbe.2022464

    Related Papers:

    [1] Chiao Ying Huang, Gerald L. Riskowski, Jennifer Chang, Ching Hsuan Lin, Jinn Tsyy Lai, Audrey Chingzu Chang . Pecan shell by-products—phenolic compound contents and antimicrobial properties. AIMS Agriculture and Food, 2020, 5(2): 218-232. doi: 10.3934/agrfood.2020.2.218
    [2] Marlin Marlin, Marulak Simarmata, Umi Salamah, Waras Nurcholis . Effect of nitrogen and potassium application on growth, total phenolic, flavonoid contents, and antioxidant activity of Eleutherine palmifolia. AIMS Agriculture and Food, 2022, 7(3): 580-593. doi: 10.3934/agrfood.2022036
    [3] Francyelli Regina Costa-Becheleni, Enrique Troyo-Diéguez, Alan Amado Ruiz-Hernández, Fernando Ayala-Niño, Luis Alejandro Bustamante-Salazar, Alfonso Medel-Narváez, Raúl Octavio Martínez-Rincón, Rosario Maribel Robles-Sánchez . Determination of bioactive compounds and antioxidant capacity of the halophytes Suaeda edulis and Suaeda esteroa (Chenopodiaceae): An option as novel healthy agro-foods. AIMS Agriculture and Food, 2024, 9(3): 716-742. doi: 10.3934/agrfood.2024039
    [4] Evi Mintowati Kuntorini, Laurentius Hartanto Nugroho, Maryani, Tri Rini Nuringtyas . Maturity effect on the antioxidant activity of leaves and fruits of Rhodomyrtus tomentosa (Aiton.) Hassk.. AIMS Agriculture and Food, 2022, 7(2): 282-296. doi: 10.3934/agrfood.2022018
    [5] Ebrahim Falahi, Zohre Delshadian, Hassan Ahmadvand, Samira Shokri Jokar . Head space volatile constituents and antioxidant properties of five traditional Iranian wild edible plants grown in west of Iran. AIMS Agriculture and Food, 2019, 4(4): 1034-1053. doi: 10.3934/agrfood.2019.4.1034
    [6] Nicolas Nagahama, Bruno Gastaldi, Michael N. Clifford, María M. Manifesto, Renée H. Fortunato . The influence of environmental variations on the phenolic compound profiles and antioxidant activity of two medicinal Patagonian valerians (Valeriana carnosa Sm. and V. clarionifolia Phil.). AIMS Agriculture and Food, 2021, 6(1): 106-124. doi: 10.3934/agrfood.2021007
    [7] Thi Thuy Le, Trung Kien Nguyen, Nu Minh Nguyet Ton, Thi Thu Tra Tran, Van Viet Man Le . Quality of cookies supplemented with various levels of turmeric by-product powder. AIMS Agriculture and Food, 2024, 9(1): 209-219. doi: 10.3934/agrfood.2024012
    [8] Julliane Destro de Lima, Wesley Ribeiro Rivadavea, Sydney Antonio Frehner Kavalco, Affonso Celso Gonçalves Junior, Ana Daniela Lopes, Glacy Jaqueline da Silva . Chemical and nutritional characterization of bean genotypes (Phaseolus vulgaris L.). AIMS Agriculture and Food, 2021, 6(4): 932-944. doi: 10.3934/agrfood.2021056
    [9] Hesti Kurniasari, Wahyudi David, Laras Cempaka, Ardiansyah . Effects of drying techniques on bioactivity of ginger (Zingiber officinale): A meta-analysis investigation. AIMS Agriculture and Food, 2022, 7(2): 197-211. doi: 10.3934/agrfood.2022013
    [10] Thornthan Sawangwan, Chompoonuth Porncharoennop, Harit Nimraksa . Antioxidant compounds from rice bran fermentation by lactic acid bacteria. AIMS Agriculture and Food, 2021, 6(2): 578-587. doi: 10.3934/agrfood.2021034
  • In the field of ophthalmology, retinal diseases are often accompanied by complications, and effective segmentation of retinal blood vessels is an important condition for judging retinal diseases. Therefore, this paper proposes a segmentation model for retinal blood vessel segmentation. Generative adversarial networks (GANs) have been used for image semantic segmentation and show good performance. So, this paper proposes an improved GAN. Based on R2U-Net, the generator adds an attention mechanism, channel and spatial attention, which can reduce the loss of information and extract more effective features. We use dense connection modules in the discriminator. The dense connection module has the characteristics of alleviating gradient disappearance and realizing feature reuse. After a certain amount of iterative training, the generated prediction map and label map can be distinguished. Based on the loss function in the traditional GAN, we introduce the mean squared error. By using this loss, we ensure that the synthetic images contain more realistic blood vessel structures. The values of area under the curve (AUC) in the retinal blood vessel pixel segmentation of the three public data sets DRIVE, CHASE-DB1 and STARE of the proposed method are 0.9869, 0.9894 and 0.9885, respectively. The indicators of this experiment have improved compared to previous methods.



    Nowadays, the development of chronic (e.g., renal failure, myocardial infarction, and heart failure) and neurogenerative (e.g., Parkinson's, multiple sclerosis, and Alzheimer's) diseases have been attributed to oxidative stress as result of an imbalance between prooxidants and antioxidants [1]. Prooxidant refers to any endobiotic or xenobiotic that induces oxidative stress either by the generation of ROS or by inhibiting antioxidant systems. It can include all reactive, free radical containing molecules in cells or tissues [2]. Free radicals such as hydroxyl, singlet oxygen, nitric oxide, hydrogen peroxide, and superoxide radicals are produced as part of normal cellular function [3]. However, above physiological levels, free radicals have been shown to induce negative health effects such as carcinogenesis, aging DNA damage, and enzyme inactivation by attacking biological macromolecules [4].

    To prevent the oxidation of molecules and cells by free radicals, the body has endogenous antioxidative systems through which it is able to quench free radicals and protect against oxidative stress [5]. Antioxidants might be categorized in multiple different ways like based on their activity, which they can be classified into two categories as enzymatic and non-enzymatic antioxidants. Enzymatic antioxidants will be breaking down and be removing free radicals by converting dangerous oxidative products to hydrogen peroxide (H2O2) and then to water, the process had multi-step and had the presence of cofactors such as copper, zinc, manganese, and iron. On the other hand, non-enzymatic antioxidants will interrupt free radical chain reactions [6]. However, in the immune system, antioxidants can deplete due to environmental pollutants, radiation, chemicals, toxins, deep-fried foods, and spicy foods as well as physical stress, which induce changes in gene expression and formation of abnormal proteins [7]. Hence, the need is for sufficient dietary levels of antioxidants, to help protect the body against oxidative stress [8].

    Phenolic compounds are natural compounds ubiquitous in plants and are the product of secondary plant metabolism [6]. They can be classified into various groups like phenolic acids, flavonoids, stilbenes, and lignans base on the presence of multiple phenolic groups that are associated with more or less complex structures [9]. Phenolic compounds are largely found in fruits, vegetables, cereals, olive, legumes, chocolate, and beverages, such as tea, coffee, and wine [9]. Although phenolics are primarily known for their antioxidative functions, they have also been shown to offer other beneficial health effects such as antidiabetic, anticancer, anti-inflammatory, cardioprotective, osteoprotective, neuroprotective, antiasthmatic, antihypertensive, antiageing, antiseptic, cerebrovascular protection, cholesterol-lowering, hepatoprotective, antifungal, antibacterial, and antiviral properties, specifically, their primary functions are as antioxidant [10]. According to previous studies, the presence of hydroxyl groups in the B-ring of flavonoids is responsible for their observed antioxidant properties through their donation of hydrogen atoms during free radical reactions [11]. Besides, phenolics is also a good source of antioxidants due to a number of different mechanisms such as free radical-scavenging, hydrogen donation, singlet oxygen quenching, metal ion chelating, and acting as a substrate for radicals such as superoxide and hydroxyl [12].

    The common bean (Phaseolus vulgaris L.) is a member of the legume family [13]. It is considered as important food resources due to their rich source of proteins, carbohydrates, dietary fiber, minerals, vitamins, phenolic acids, and flavonoids [14]. Many studies show that diets including common beans help reduce LDL-cholesterol while increasing HDL-cholesterol, thus helping reduce risks of cardiovascular diseases, obesity, and diabetes [15]. Moreover, previous researchers reported that common bean containing phenolics and showed high antioxidant activity by in vitro methods of 2, 2-Diphenyl-1-picrylhydrazyl (DPPH), ferric-reducing antioxidant power (FRAP), and oxygen radical absorbance capacity (ORAC) [16,17,18,19]. Therefore, the objectives of the present study were to determine the total phenolic and flavonoid contents as well as the antioxidant potential of common bean (Phaseolus vulgaris L.) in Vietnam.

    Leaves, pods, and seeds of common bean (GRIS2) (Figure 1) were collected at Genomic Research Institute and Seed (GRIS), Ton Duc Thang University, Ho Chi Minh City, Vietnam. Before extraction, they were cleaned to eliminate soil and damaged seeds, dried and ground into a fine powder. The sample extract was extracted using the method according to [20]. The leaves, pods, and seeds extract were individually prepared in methanol (plant: solvent ratio [1: 10], w/v), and extracted for shaken overnight at 28 ℃. The extract was then filtered through filter paper. The solvent was then removed by evaporation in a vacuum to obtain dry extracts. This process was repeated once. The extracts were stored at 4 ℃ in a refrigerator prior to use.

    Figure 1.  Common bean (Phaseolus vulgaris L.) (A) Leaves, (B) Pods, (C) Seeds, and (D) Flowers.

    The total phenolic content of each leaf, pods, and seeds extract was determined using the Folin-Ciocalteu reagent as described by the method of Singleton et al. [21] with slight modification. Approximately 0.5 mL of each extract was dissolved in methanol (100 μg/mL) was mixed with 2.5 mL of Folin-Ciocalteu reagent (0.2 N). This mixture was shaken well and was kept at room temperature for 5 min and then, 2 mL of sodium carbonate solution (75 g/L) was added. After 2 h of incubation in the dark, the absorbencies were measured at 760 nm against a water blank using a UV-Vis spectrophotometer. The same procedure was repeated by gallic acid solutions used as a standard for the calibration curve. The concentrations of the standard were set at 0, 0.02, 0.04, 0.06, 0.08 and 0.1 mg/mL. The determination was performed in triplicate and the results were expressed as terms of gallic acid equivalent (mg of GAE/g of extract).

    The total flavonoid content of each leaf, pods, and seeds extract was determined using the Dowd method as described by Sawadogo et al. [22] with slight modification. In brief, 2 mL of 2% AlCl3 in methanol was mixed with 2 mL of each extract (100 μg/mL), shacked well, and hold for 10 minutes. Absorption was read at 415 nm against a blank sample consisting of 2 mL of methanol and 2 mL of each extract without AlCl3 using a UV-vis spectrophotometer. The same procedure was repeated by rutin solutions used as a standard for the calibration curve. The concentrations of the standard were set at 0, 0.02, 0.04, 0.06, 0.08 and 0.1 mg/mL. The determination was performed in triplicate and the results were expressed as terms of rutin equivalents (mg of RE/g of extract).

    Methanol extract from leaf, pod, and the seed of common bean was subjected to gas chromatography-mass spectrometry (GC-MS) analysis. The GC-MS was equipped with a DB-5MS column (30 m, 0.25 mm, and 0.25 μm) (Agilent Technologies, J & W Scientific Products, Folsom, CA, USA.). Helium gas was used as the carrier gas with a split ratio of 5:1. The temperature program was as follows: initial temperature of 50 ℃ without hold time and gradually increased to 300 ℃ at a rate of 10 ℃/min for 20 min of hold time. The injector and detector temperatures were set to 300 ℃ and 320 ℃, respectively. The mass spectra were scanned from 29 to 800 amu. The identification and characterization of chemical compounds in various crude extracts were based on the JEOL's GC-MS Mass Center System software, version 2.65a (JEOL Ltd., Tokyo, Japan).

    The DPPH (2, 2-Diphenyl-1-picrylhydrazyl) assay is one of the most commonly employed methods because it is simple, efficient, and inexpensive. DPPH radical scavenging method was used to evaluate the antioxidant properties of each leaf, pods, and seeds bean extract. The standard procedure for the DPPH assay was performed based on Bakasso et al. [23] with minor modifications. The samples were added of 1.5 mL DPPH solution (80 μg /mL) to 0.75 mL various concentrations (6.25, 12.5, 25, 50, and 100 μg/mL) of each extract. The solution was mixed vigorously and left to stand at room temperature for 30 minutes in the dark after which its absorbance was measured spectrophotometrically at 517nm, the analysis was done in triplicate. A positive control (ascorbic acid) was prepared in the same way as samples, while the blank solution by adding 0.75 mL methanol to 1.5 mL of DPPH (80 μg/mL solution). The absorbance of blank, positive control, and samples were recorded.

    The percentage of inhibition can be calculated using the formula:

     Inhibition (%)=(ABAA/AB)×100 (1)

    Where AB is the absorbance of the control and AA is the absorbance of the test. EC50 (μg/mL) was defined as the half-maximal effective concentration of the amount of sample necessary to decrease the absorbance of DPPH by 50%. It was obtained by interpolation from the linear regression analysis.

    The results were expressed as mean ± standard deviation of at least triplicate measurements. Analysis of variance (ANOVA) and Duncan's multiple range test were used for determining the significant differences at P < 0.05. All statistical analyses were carried out using the statistical program are SAS version 8.0 and Microsoft Excel 2010 software.

    The content of total phenols in different extracts was presented in Table 1. The highest phenolic content was found in methanol extracts of pods (95.41 ± 1.18 mg GAE/g). Whereas methanol extracts of seeds contained considerably least content of phenols (6.87 ± 1.45 mg GAE/g).

    Table 1.  Total phenolic and total flavonoid contents of leaves, pods, and seeds of common bean.
    Categories Total phenolic content (mg GAE/g) Total flavonoid content (mg RE/g)
    Leaves 58.68 ± 1.81b 44.59 ± 2.15a
    Pods 95.41 ± 1.18a 3.64 ± 0.87b
    Seeds 6.87 ± 1.45c 9.29 ± 1.65b
    All data are mean ± SD of triplicate (n = 3) analyses. Values with a different superscript in the same column differ significantly (P < 0.01).

     | Show Table
    DownLoad: CSV

    The results of the total flavonoids contents determination of the examined plant extract are presented in Table 1. The highest flavonoid content was found in methanol extracts of leaves (44.59 ± 2.15 mg RE/g). Meanwhile, the methanol extract of seeds and pods contained less flavonoid content (9.29 ± 1.65 mg RE/g and 3.64 ± 0.87 mg RE/g, respectively).

    The chemical components in methanol extract from the leaves, seed, and pods of common bean were successfully analyzed using GC-MS in Figure 2. In total, 76 compounds were detected and presented in Table 2. Of these, the presence of 29, 18, and 29 various phytocompounds in methanol extract from the leaves, seed, and pods respectively. The methanol extract from pods presented the highest amount of phytocomponents compared to methanol extract from leaves and seed. The present study successfully identified the bioactive components present in methanol extract from leaves, pods, and seeds of the common bean by GC-MS included phenolics, flavonoids, fatty acids, amino acid, terpenoids, sterols, carbohydrates, alcohols, volatile oils, fatty acid ester, ester, amines, and others.

    Figure 2.  Mass Spectrometry of methanol extract from the leaves, seed, and pods of common bean.
    Table 2.  Chemical profile in methanol extract from the leaves, seed, and pods of common bean.
    Peak number Leaf Pod Seed Chemical class
    1 Desulphosinigrin - - -
    2 Butyrolactone - - -
    3 Cyclooctanone - - -
    4 Nanofin - - -
    5 Oxacyclododecan-2-one - - -
    6 8-Aminocaprylic acid - - Amino acid lysine
    7 Pebulate - - Colorless oil
    8 1, 2-Benzenedimethanol - - -
    9 Bioallethrin - - Ectoparasiticide
    10 Gibberellic acid - - Pentacyclic diterpene
    11 1, 3, 5-Triazin-2-amine, N-ethyl-4-methoxy- - - -
    12 Dodecanoic acid - - Fatty acid
    13 N-(2-Acetamido) iminodiacetic acid - - Dicarboxylic acid
    14 3-Hydroxy-β-damascone - - -
    15 Methoprene - - Terpenoid
    16 Gamolenic Acid - - Fatty acid
    17 γ-Tocopherol - - Terpenoid
    18 Phytol, acetate - - Acyclic diterpene
    19 Vitamin E - - Terpenoid
    20 Trilinolein - - Fatty acid
    21 Stigmasterol - - Sterol
    22 δ-Tocopherol, O-acetyl- - - Terpenoid
    23 Aspidofractinine-3-methanol, (2α, 3β, 5α)- - - Alcohol
    24 Butyrolactone - - Ester
    25 Cholesterol, 7-oxo- - - -
    26 p-Menthane-1, 2, 3-triol - - Terpenoid
    27 trans-Isoeugenol - - Volatile oil
    28 2-n-Propylthiane - - -
    29 4-Nonene - - -
    30 - 1H-Pyrrole, 2, 4-dimethyl- - Volatile oil
    31 - 2-t-Butyl-5-propyl-[1,3]dioxolan-4-one - -
    32 - l-Alanine, N-methoxycarbonyl-, butyl ester - Amino acid ester
    33 - β-D-Glucopyranose, 1-thio-, 1-[N-hydroxy-5-(methylthio)pentanimidate] - Glycoside
    34 - 2-Methyl-3-(methylthio)-1-propene - -
    35 - 4-Cyclopentene-1, 3-dione - -
    36 - (S)-(+)-2-Amino-3-methyl-1-butanol - Amino alcohol
    37 - 4H-Pyran-4-one, 2, 3-dihydro-3, 5-dihydroxy-6-methyl- - Phenolic
    38 - N-(N-Glycyl-glycyl)-glycine - Amino acid
    39 - 3-Methyladipic acid - Fatty acid
    40 - Glycylsarcosine - -
    41 - Clindamycin - Phenolic
    42 - 2-Propyl-tetrahydropyran-3-ol - Alcohol
    43 - dl-Lysine - Diamino acid
    44 - 5-Hydroxymethylfurfural - Carbohydrate
    45 - Showdomycin - Phenolic
    46 - Nitrosothymol - -
    47 - β-D-Glucopyranoside, methyl - Carbohydrate
    48 - Acetic acid, 2, 2'-[oxybis(2, 1-ethanediyloxy)]bis- - -
    49 - Ingol 12-acetate - -
    50 - Acetamide, N-(4-ethoxy-3-hydroxyphenyl)- - -
    51 - 1, 2-Benzenedicarboxylic acid, butyl octyl ester - Ester
    52 - 9, 12-Octadecadienoic acid, methyl ester, (E, E)- - Fatty acid
    53 - 9, 12, 15-Octadecatrienoic acid, (Z, Z, Z)- - Fatty acid
    54 - Octadecanoic acid - Fatty acid
    55 - α-Amyrin - Triterpene
    56 - 3β-Myristoylolean-12-en-16β-ol - -
    57 - E-11-Methyl-12-tetradecen-1-ol acetate - -
    58 - HEPES - -
    59 Thymol
    60 - - 1H-Pyrrole, 2, 4-dimethyl- Phenolic
    61 - - γ-Dodecalactone Ester
    62 - - Benzofuran, 2, 3-dihydro- Phenolic
    63 - - Pyridine, 1, 2, 3, 6-tetrahydro-1, 2-dimethyl- Pyridine
    64 - - Tridecane Alkane hydrocarbon
    65 - - Maltol -
    66 - - Isoglutamine Gamma amino acid
    67 - - Cycloate Aliphatic amine
    68 - - 3-Butylindolizidine Alkaloid
    69 - - Dibutyl phthalate Ester
    70 - - Hexadecanoic acid, ethyl ester Fatty acid ester
    71 - - 9, 12-Octadecadienoic acid (Z, Z)-, methyl ester Fatty acid ester
    72 - - 10-Octadecenoic acid, methyl ester Fatty acid ester
    73 - - 9, 12-Octadecadienoic acid (Z, Z)- Fatty acid
    74 - - β-Sitosterol Sterol
    75 - - Bacteriochlorophyll-c-stearyl -
    76 - - Glycerol 1-stearate Ester

     | Show Table
    DownLoad: CSV

    In this study, the DPPH radical scavenging potential of methanol extracts from the leaves, seed, and pods of common bean and ascorbic acid were represented in Table 3 and EC50 values result of different extracts were calculated by using concentration with mean percent inhibition of the DPPH radical curve of each different extracts also were presented in Table 3. From Table 3, all the extracts showed an inhibitory potential against DPPH free radical. The inhibitory percentages varied from 5.12 ± 0.35% for the seeds extract to 98.88 ± 0.03% for the vitamin C. The EC50 values of the antioxidant capacity varied significantly (P < 0.01) from 23.31 μg/mL for the vitamin C to 486.2 μg/mL for the seeds extract. As it was known, the lower the EC50 value the higher the antioxidant capacity of the plant extract. As can be seen from Table 3, the methanol extracts of leaves have the highest antioxidant capacity with inhibitory percentages are 48.74 ± 0.32% at a concentration of 100 μg/mL and EC50 value was 137.4 μg/mL compared to the other extracts and 6 times lower than vitamin C. The methanol extracts of seed had the lowest antioxidant capacity with inhibitory percentages was 13.99 ± 1.22% at a concentration of 100 μg/mL and EC50 value was 486.2 μg/mL compared to the other extracts and 21 times lower than vitamin C.

    Table 3.  Percentage inhibition of DPPH free radical scavenging activity and EC50 of ascorbic acid and plants extract common bean.
    Treatment DPPH inhibition (%) EC50 Value (μg/mL)
    6.25 μg/mL 12.5 μg/mL 25 μg/mL 50 μg/mL 100 μg/mL
    Seeds 5.12 ± 0.35d 6.07 ± 1.27d 7.42 ± 0.67d 9.78 ± 0.44d 13.99 ± 1.22d 486.2
    Pods 14.19 ± 1.62c 14.82 ± 1.28c 16.94 ± 0.17c 20.03 ± 0.69c 25.93 ± 1.70c 290.3
    Leaves 45.60 ± 0.32a 45.87 ± 0.59a 46.20 ± 0.91b 47.13 ± 0.05b 48.74 ± 0.32b 137.4
    Vitamin C 36.18 ± 1.00b 40.00 ± 1.79b 55.16 ± 2.52a 71.79 ± 1.41a 98.88 ± 0.03a 23.31
    All data are mean ± SD of triplicate (n = 3) analyses. Values with a different superscript in the same column differ significantly (P < 0.01).

     | Show Table
    DownLoad: CSV

    The consumption of common bean (Phaseolus vulgaris L.) has been greatly connected with many physiological and health-promoting effects such as the prevention of cardiovascular diseases, obesity, diabetes mellitus, and cancers [10]. The antioxidant properties of phenolic compounds lie in their ability to neutralize free radicals and the chelation of transition metals, thus they counteract the initiation and propagation of oxidative processes [24]. In the present study, total phenolic acid and total flavonoid contents and antioxidant activity in vitro were determined for methanol extracts of leaves, seeds, and pods of common bean.

    In the present study, the total phenolic contents of seeds were 6.87 ± 1.45 mg GAE/g (Table 1) whereas according to Yao et al. [13] reported that common bean contained 8.59 mg GAE/g total phenols, besides, according to Ombra et al. [25] reported that total phenolic content of the common bean in the range of 0.14-1.29 mg GAE/g. The total flavonoid content of seeds bean was 9.29 mg RE/g (Table 1) and was higher than the previously reported by Oomah et al. [26] for selected common bean in the range of 0.41-1.02 mg RE/g. The difference in the total contents of phenolic acid and flavonoid may be due to differences in the geographical region, environmental, climatic condition, and storage, and processing methods [27]. In addition, in the current study, the total contents of flavonoid and phenolic acid were different among leaves, pods, and seeds bean. These results showed that different levels of phenolic acids and flavonoids were influenced by the interaction between parts of plants. This finding is in agreement with that of Males et al. [28] who reported that I. candida contains higher phenolic compounds in leaves (1.031-1.423%) compared to stem (0.411-0.516%). Ghasemzadeh et al. [29] also recorded the total flavonoid and phenolic acid contents in the leaves were more than in the rhizomes, followed by contents in the stems. Elkhamlichia et al. [30] also confirmed that Calycotome villosa subsp. Intermedia had the total flavonoids contents in seeds. Previous studies by Ferry et al. [31] and Elattar and Virji [32] have shown that some flavonoids components such as quercetin, rutin had anticancer activities and were able to inhibit cancer cell growth. Therefore, the results of this study showed that flavonoids are important components of this plant.

    Among the compounds discovered, several are reported as potential therapeutic agents. For instance, 9, 12-octadecadienoic acid, methyl ester is effective antihistamines, anti-coronary, insectifuge, and antieczemic [33]. Terpenoids have also been reported to exhibit antiplasmodial, antineoplastic, and antiviral activities [34]. Van Acker et al. [35] found other molecular parameters related to electron distribution and structure, which correlate with the antioxidant action of vitamin E and its derivatives. Besides, flavonoids and phenolics are polyphenols that have been reported to possess great antioxidant properties due to the reducing ability of flavonoids when they play an important role in neutralizing free radicals and scavenging radicals or suppressing lipid peroxidation [26]. Vitamin P (Rutin) is a flavonol, it has demonstrated a number of pharmacological activities, including antioxidant, cytoprotective, vasoprotective, anticarcinogenic, neuroprotective, and cardioprotective activities [36,37,38,39], whereas showdomycin and clindamycin were known as an antibiotic [38].

    Phenolic compounds restrain the formation of superoxide anion as well as the production of reactive oxygen species by inhibiting key enzymes such as protein kinase, xanthine oxidase, lipoxygenase, cyclooxygenase, S-transferase, glutathione, and NADH oxidase [26]. Moreover, in aqueous and lipophilic phases, these compounds also serve as hydrogen donating radical scavengers. The ability of flavonoids to complex with metal ions plays an important role in their antioxidant activity [24]. There is a specific relationship between flavonoid structures and their antioxidant activity as the larger the number of hydroxyl groups in the flavonoid nucleus, the greater would be the antioxidant activity [40].

    According to [25] reported the common bean to have EC50 value in the range of 1570-55200 μg/mL. In this study, the EC50 value of seeds was 486.2 μg/mL whereas, the EC50 value of leaves was 137.4 μg/mL showed that the antioxidant activity of leaves bean higher than seeds (Table 3). Moreover, the total flavonoid contents of leaves bean also higher than seeds (Table 1). Hence, the different antioxidant activity might as well be due to the presence of phenolic compounds, especially the flavonoid contents in this plant. The antioxidant activity of phenolic compounds was based on several different mechanisms. It has the ability to scavenging of free radicals by single electron transfer and the hydrogen atoms in their hydroxyl groups, chelation of metal ions such as iron and copper, or inhibition of enzymes responsible for a free radical generation [26,41].

    From the determination of total phenolic contents, total flavonoid contents, and antioxidant activity in this study observed that the extracts of the pod bean showed the highest content of total phenolic; however, leaves bean although containing slightly fewer content of phenolic acid, exhibited higher total flavonoid content, and its highest the antioxidant capacity. The antioxidant capacity of phenolic compounds depends on the number and position of free OH groups [42], which means, the many free hydroxyl groups present in polyphenols, the higher their radical scavenging capacity. This reinforced the idea that the antioxidant potential could be linked strongly to the content of flavonoids in this plant.

    Common bean could be a good source of natural antioxidants. In this study showed the methanol extracts from leaves, pods, and seeds of common bean exhibit good antioxidant ability on the DPPH radical scavenging potential, in which, the extracts of the leaves showed higher scavenging activities than the pods and seeds. Moreover, the total flavonoid content in extracts from leaves also higher than the pods and seed although the total phenolic acid content was found in extracts from extracts of pods higher than the leaves and seeds. Therefore, the results of this study showed that the positive relationship between total flavonoids content and antioxidant activities in this plant.

    The authors declare that there is no conflict of interest.



    [1] C. Y. Cheung, D. Xu, C. Y. Cheng, C. Sabanayagam, T. Y. Wong, A deep-learning system for the assessment of cardiovascular disease risk via the measurement of retinal-vessel calibre, Nat. Biomed. Eng., 5 (2021), 498–508. https://doi.org/10.1038/s41551-020-00626-4 doi: 10.1038/s41551-020-00626-4
    [2] A. M. Mendonca, A. Campilho, Segmentation of retinal blood vessels by combining the detection of centerlines and morphological reconstruction, Ieee. T. Med. Imaging., 25 (2006), 1200–1213. https://doi.org/10.1109/tmi.2006.879955 doi: 10.1109/tmi.2006.879955
    [3] Y. Yin, M. Adel, S. Bourennane, Automatic segmentation and measurement of vasculature in retinal fundus images using probabilistic formulation, Comput. Math. Methods. Med., 2013 (2013), 260410. https://doi.org/10.1155/2013/260410 doi: 10.1155/2013/260410
    [4] D. H. Ye, D. Kwon, I. D. Yun, S. U. Lee, Fast multiscale vessel enhancement filtering, in Proceedings of SPIE - The International Society for Optical Engineering, 6914 (2008), 691423. https://doi.org/10.1117/12.770038
    [5] I. Lázár, A. Hajdu, Segmentation of retinal vessels by means of directional response vector similarity and region growing, Comput. Biol. Med., 66 (2015), 209–221. https://doi.org/10.1016/j.compbiomed.2015.09.008 doi: 10.1016/j.compbiomed.2015.09.008
    [6] L. C. Neto, G. Ramalho, J. Neto, R. Veras, F. Medeiros, An unsupervised coarse-to-fine algorithm for blood vessel segmentation in fundus images, Expert. Syst. Appl, 78 (2017), 182–192. https://doi.org/10.1016/j.eswa.2017.02.015 doi: 10.1016/j.eswa.2017.02.015
    [7] U. Nguyen, A. Bhuiyan, L. Park, K. Ramamohanarao, An effective retinal blood vessel segmentation method using multi-scale line detection, Pattern. Recogn., 46 (2013), 703–715. https://doi.org/10.1016/j.patcog.2012.08.009 doi: 10.1016/j.patcog.2012.08.009
    [8] J. Staal, M.D. Abramoff, M. Niemeijer, M.A. Viergever, B. van Ginneken, Ridge-based vessel segmentation in color images of the retina, IEEE. T. Med. Imaging., 23 (2004), 501–509. https://doi.org/10.1109/TMI.2004.825627 doi: 10.1109/TMI.2004.825627
    [9] E. Ricci, R. Perfetti, Retinal blood vessel segmentation using line operators and support vector classification. IEEE. T. Med. Imaging., 26 (2007), 1357–1365. https://doi.org/10.1109/TMI.2007.898551 doi: 10.1109/TMI.2007.898551
    [10] S. Franklin, S. Rajan, Computerized screening of diabetic retinopathy employing blood vessel segmentation in retinal images, Biocybern. Biomed. Eng., 34 (2014), 117–124. https://doi.org/10.1016/j.bbe.2014.01.004 doi: 10.1016/j.bbe.2014.01.004
    [11] A. Krizhevsky, I. Sutskever, G. Hinton, ImageNet classification with deep convolutional neural networks, Commun. ACM, 60 (2017), 84–90. https://doi.org/10.1145/3065386 doi: 10.1145/3065386
    [12] K. Simonyan, A. Zisserman, Very deep convolutional networks for large-scale image recognition, Comput. Sci, 2014. https://doi.org/10.48550/arXiv.1409.1556
    [13] C. Szegedy, W. Liu, Y. Jia, P. Sermanet, A. Rabinovich, Going deeper with convolutions, in 2015 IEEE Conference on Computer Vision and Pattern Recognition (CVPR), (2015), 1–9. https://doi.org/10.1109/CVPR.2015.7298594
    [14] K. He, X. Zhang, S. Ren, J. Sun, Deep residual learning for image recognition, in Proceedings of the IEEE conference on computer vision and pattern recognition, (2016), 770–778. https://doi.org/10.1109/CVPR.2016.90
    [15] G. Huang, Z. Liu, V. Laurens, K. Weinberger, Densely connected convolutional networks, in 2017 IEEE Conference on Computer Vision and Pattern Recognition (CVPR), (2017), 2261–2269. https://doi.org/10.1109/CVPR.2017.243
    [16] O. Ronneberger, P. Fischer, T. Brox, U-Net: Convolutional networks for biomedical image segmentation, in International Conference on Medical image computing and computer-assisted intervention, (2015), 234–241. https://doi.org/10.1007/978-3-319-24574-4_28
    [17] Z. Zhou, M. Siddiquee, N. Tajbakhsh, J. Liang, UNet++: A nested U-Net architecture for medical image segmentation, Lecture Notes in Computer Science, Springer, Cham, 11045 (2018). https://doi.org/10.1007/978-3-030-00889-5_1
    [18] Q. Jin, Z. Meng, T. Pham, Q. Chen, L. Wei, R. Su, DUNet: A deformable network for retinal vessel segmentation, Know.-Based Syst., 178 (2019), 149–162. https://doi.org/10.1016/j.knosys.2019.04.025 doi: 10.1016/j.knosys.2019.04.025
    [19] O. Oktay, J. Schlemper, L. Folgoc, M. Lee, M. Heinrich, K. Misawa, et al., Attention U-Net: Learning where to look for the pancreas, 2018. https://doi.org/10.48550/arXiv.1804.03999
    [20] J. Ding, Z. Zhang, J. Tang, F. Guo, A multichannel deep neural network for retina vessel segmentation via a fusion mechanism, Front. Bioeng. Biotechnol., 9 (2021), 663. https://doi.org/10.3389/fbioe.2021.697915 doi: 10.3389/fbioe.2021.697915
    [21] X. Sun, X. Cao, Y. Yang, L. Wang, Y. Xu, Robust retinal vessel segmentation from a data augmentation perspective, Ophthalmic Medical Image Analysis, Lecture Notes in Computer Science, Springer, Cham, 12970 (2021), 189–198. https://doi.org/10.1007/978-3-030-87000-3_20
    [22] Z. Li, M. Jia, X. Yang, M. Xu, Blood vessel segmentation of retinal image based on Dense-U-Net Network, Micromachines, 12 (2021), 1478. https://doi.org/10.3390/mi12121478 doi: 10.3390/mi12121478
    [23] M. Alom, M. Hasan, C. Yakopcic, T. Taha, V. K. Asari, Recurrent residual convolutional neural network based on U-Net (R2U-Net) for medical image segmentation, preprint, arXiv: 1802.06955.
    [24] W. Liu, Y. Jiang, J. Zhang, Z. Ma, RFARN: Retinal vessel segmentation based on reverse fusion attention residual network, PLoS ONE, 16 (2021). https://doi.org/10.1371/journal.pone.0257256 doi: 10.1371/journal.pone.0257256
    [25] Q. Yang, B. Ma, H. Cui, J. Ma, AMF-NET: Attention-aware multi-scale fusion network for retinal vessel segmentation, in 2021 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), (2021), 3277–3280. https://doi.org/10.1109/EMBC46164.2021.9630756
    [26] J. Fu, J. Liu, H. Tian, Y. Li, Y. Bao, Z. Fang, et al., Dual attention network for scene segmentation, in Proceedings of the IEEE/CVF conference on computer vision and pattern recognition, (2019), 3141–3149. https://doi.org/10.1109/CVPR.2019.00326
    [27] I. Goodfellow, J. Pouget-Abadie, M. Mirza, B. Xu, D. Warde-Farley, S. Ozair, et al., Generative adversarial nets, in Proceedings of the 27th International Conference on Neural Information Processing Systems, 27 (2014), 2672–2680. https://doi.org/10.48550/arXiv.1406.2661
    [28] M. Mirza, S. Osindero, Conditional generative adversarial nets, Comput. Therm. Sci., (2014), 2672–2680. https://doi.org/10.48550/arXiv.1411.1784
    [29] B. Lei, Z. Xia, F. Jiang, X. Jiang, S. Wang, Skin lesion segmentation via generative adversarial networks with dual discriminators, Med. Image. Anal., 64 (2020), 101716, https://doi.org/10.1016/j.media.2020.101716 doi: 10.1016/j.media.2020.101716
    [30] A. Radford, L. Metz, S. Chintala, Unsupervised representation learning with deep convolutional generative adversarial networks, preprint, arXiv: 1511.06434.
    [31] P. Isola, JY. Zhu, T. Zhou, AA. Efros, Image-to-Image translation with conditional adversarial networks, in Proceedings of the IEEE conference on computer vision and pattern recognition, (2017), 5967–5976. https://doi.org/10.1109/CVPR.2017.632
    [32] T. Yang, T. Wu, L. Li, C. Zhu, SUD-GAN: Deep convolution generative adversarial network combined with short connection and dense block for retinal vessel segmentation, J. Digit. Imaging., 33 (2020), 946–957. https://doi.org/10.1007/s10278-020-00339-9. doi: 10.1007/s10278-020-00339-9
    [33] J. Son, S. Park, K. Jung, Towards accurate segmentation of retinal vessels and the optic disc in fundoscopic images with generative adversarial networks, J. Digit. Imaging., 32 (2019), 499–512. https://doi.org/10.1007/s10278-018-0126-3 doi: 10.1007/s10278-018-0126-3
    [34] X. Dong, Y. Lei, T. Wang, M. Thomas, L. Tang, W. J. Curran, et al., Automatic multiorgan segmentation in thorax CT images using U-Net-GAN, Med. Phys., 46 (2019), 2157–2168. https://doi.org/10.1002/mp.13458 doi: 10.1002/mp.13458
    [35] J. Zhang, L. Yu, D. Chen, W. Pan, C. Shi, Y. Niu, et al., Dense GAN and multi-layer attention based lesion segmentation method for COVID-19 CT images, Biomed. Signal. Process. Control., 69 (2021), 102901. https://doi.org/10.1016/j.bspc.2021.102901 doi: 10.1016/j.bspc.2021.102901
    [36] A. You, J. Kim, I. Ryu, T. Yoo, Application of generative adversarial networks (GAN) for ophthalmology image domains: a survey, Eye. Vis. (Lond), 9 (2022), 1–19, https://doi.org/10.1186/s40662-022-00277-3 doi: 10.1186/s40662-022-00277-3
    [37] V. Bellemo, P. Burlina, Y. Liu, T. Wong, D. Ting, Generative adversarial networks (GANs) for retinal fundus image synthesis, in Computer Vision – ACCV 2018 Workshops, Lecture Notes in Computer Science, Springer, Cham, 11367 (2018), 289–302. https://doi.org/10.1007/978-3-030-21074-8_24
    [38] S. Kamran, K. Hossain, A. Tavakkoli, S. Zuckerbrod, K. Sanders, S. Baker, RV-GAN: Segmenting retinal vascular structure in fundus photographs using a novel multi-scale generative adversarial network, in MICCAI 2021: Medical Image Computing and Computer Assisted Intervention, Lecture Notes in Computer Science, Springer, 12908 (2021), 34–44. https://doi.org/10.1007/978-3-030-87237-3_4
    [39] M. Alom, M. Hasan, C. Yakopcic, T. Taha, Inception recurrent convolutional neural network for object recognition, preprint, arXiv: 1704.07709.
    [40] M. Alom, M. Hasan, C. Yakopcic, T. Taha, V. Asari, Improved inception-residual convolutional neural network for object recognition, preprint, arXiv: 1712.09888.
    [41] C. Owen, A. Rudnicka, R. Mullen, S. Barman, D. Monekosso, P. Whincup, et al., Measuring retinal vessel tortuosity in 10-year-old children: validation of the computer-assisted image analysis of the retina (CAIAR) program, Invest. Ophth. Vis. Sci., 50 (2009), 2004–2010. https://doi.org/10.1167/iovs.08-3018 doi: 10.1167/iovs.08-3018
    [42] A. D. Hoover, V. Kouznetsova, M. Goldbaum, Locating blood vessels in retinal images by piecewise threshold probing of a matched filter response, IEEE. T. Med. Imaging., 19 (2000), 203–210. https://doi.org/10.1109/42.845178 doi: 10.1109/42.845178
    [43] C. Guo, M. Szemenyei, Y. Yi, W. Wang, B. Chen, C. Fan, SA-UNet: Spatial attention U-Net for retinal vessel segmentation, in 2020 25th International Conference on Pattern Recognition (ICPR), (2021), 1236–1242. https://doi.org/10.48550/arXiv.2004.03696
    [44] J. Zhuang, LadderNet: Multi-path networks based on U-Net for medical image segmentation, preprint, arXiv: 1810.07810
    [45] L. Li, M. Verma, Y. Nakashima, H. Nagahara, R. Kawasaki, Iternet: Retinal image segmentation utilizing structural redundancy in vessel networks, in 2020 IEEE Winter Conference on Applications of Computer Vision (WACV), (2020), 3645–3654. https://doi.org/10.1109/WACV45572.2020.9093621
    [46] H. Ding, X. Cui, L. Chen, K. Zhao, MRU-Net: A U-shaped network for retinal vessel segmentation, Appl. Sci., 10 (2020), 6823. https://doi.org/10.3390/app10196823 doi: 10.3390/app10196823
    [47] D. Huang, L. Yin, H. Guo, W. Tang, T. Wan, FAU-Net: Fixup initialization channel attention neural network for complex blood vessel segmentation, Appl. Sci., 10 (2020), 6280. https://doi.org/10.3390/app10186280 doi: 10.3390/app10186280
  • This article has been cited by:

    1. Ibtissem Moussa, Imene Ghezal, Faouzi Sakli, Valorization of Pelargonium graveolens L’Hér. Hydrodistillation Solid Waste as Natural Dye for Wool Fabrics, 2023, 20, 1544-0478, 10.1080/15440478.2022.2156966
    2. Felipe Ávila, Nadia Cruz, Jazmin Alarcon-Espósito, Nélida Nina, Hernán Paillan, Katherine Márquez, Denis Fuentealba, Alberto Burgos-Edwards, Cristina Theoduloz, Carmina Vejar-Vivar, Guillermo Schmeda-Hirschmann, Inhibition of advanced glycation end products and protein oxidation by leaf extracts and phenolics from Chilean bean landraces, 2022, 98, 17564646, 105270, 10.1016/j.jff.2022.105270
    3. Sabry M. Youssef, Antonio López-Orenes, María A. Ferrer, Antonio A. Calderón, Foliar Application of Salicylic Acid Enhances the Endogenous Antioxidant and Hormone Systems and Attenuates the Adverse Effects of Salt Stress on Growth and Yield of French Bean Plants, 2023, 9, 2311-7524, 75, 10.3390/horticulturae9010075
    4. Jazmín Alarcón-Espósito, Nélida Nina, Cristina Theoduloz, Alberto Burgos-Edwards, Hernán Paillan, Guillermo Schmeda-Hirschmann, Phenolic Composition and α-Glucosidase Inhibition of Leaves from Chilean Bean Landraces, 2022, 77, 0921-9668, 135, 10.1007/s11130-022-00955-6
    5. Yuraporn Sahasakul, Amornrat Aursalung, Sirinapa Thangsiri, Pitthaya Wongchang, Parichart Sangkasa-ad, Aphinya Wongpia, Auytin Polpanit, Woorawee Inthachat, Piya Temviriyanukul, Uthaiwan Suttisansanee, Nutritional Compositions, Phenolic Contents, and Antioxidant Potentials of Ten Original Lineage Beans in Thailand, 2022, 11, 2304-8158, 2062, 10.3390/foods11142062
    6. Gokhan Zengin, Álvaro Fernández-Ochoa, María de la Luz Cádiz-Gurrea, Francisco Javier Leyva-Jiménez, Antonio Segura-Carretero, Fevzi Elbasan, Evren Yildiztugay, Sumira Malik, Asaad Khalid, Ashraf N. Abdalla, Mohamad Fawzi Mahomoodally, Phytochemical Profile and Biological Activities of Different Extracts of Three Parts of Paliurus spina-christi: A Linkage between Structure and Ability, 2023, 12, 2076-3921, 255, 10.3390/antiox12020255
    7. Yenework Nigussie Ashagrie, Mesfin Getachew Tadesse , Rakesh Kumar Bachheti , Archana Bachheti , Manjusha Tyagi, Nishant Rai, Exploring the bioactive potential and safety profile of Caesalpinia decapetala seeds and seed oil, 2024, 25, 2278-5124, 747, 10.36953/ECJ.28022854
    8. Menglu Xia, Minhao Li, Thaiza Serrano Pinheiro de Souza, Colin Barrow, Frank Rowland Dunshea, Hafiz Ansar Rasul Suleria, LC-ESI-QTOF-MS2 Characterization of Phenolic Compounds in Different Lentil (Lens culinaris M.) Samples and Their Antioxidant Capacity, 2023, 28, 2768-6701, 10.31083/j.fbl2803044
  • Reader Comments
  • © 2022 the Author(s), licensee AIMS Press. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0)
通讯作者: 陈斌, bchen63@163.com
  • 1. 

    沈阳化工大学材料科学与工程学院 沈阳 110142

  1. 本站搜索
  2. 百度学术搜索
  3. 万方数据库搜索
  4. CNKI搜索

Metrics

Article views(3578) PDF downloads(158) Cited by(14)

Figures and Tables

Figures(12)  /  Tables(5)

/

DownLoad:  Full-Size Img  PowerPoint
Return
Return

Catalog